Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

HomodimerDB
>protein (length=60)
LKCNKLVPLFYKTCPAGKNLCYKMFMVATPKVPVKRGCIDVCPKSSLLVKYVCCNTDRCN

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 1xt3-a1-m2-cB 60 60 1.0000 1.0000 1.0000 6.58e-38 1xt3-a1-m1-cA_1xt3-a1-m2-cB
2 1xt3-a1-m1-cA 60 60 1.0000 1.0000 1.0000 6.58e-38 1xt3-a1-m1-cA_1xt3-a1-m2-cB
3 4om4-a1-m1-cE 60 60 0.9000 0.9000 0.9000 1.46e-33 4om4-a1-m1-cA_4om4-a1-m1-cE, 4om4-a1-m1-cC_4om4-a1-m1-cE, 4om4-a1-m1-cD_4om4-a1-m1-cE
4 4om4-a1-m1-cD 60 60 0.9000 0.9000 0.9000 1.46e-33 4om4-a1-m1-cD_4om4-a1-m1-cE
5 4om4-a1-m1-cC 60 60 0.9000 0.9000 0.9000 1.46e-33 4om4-a1-m1-cA_4om4-a1-m1-cC, 4om4-a1-m1-cC_4om4-a1-m1-cE
6 4om4-a1-m1-cB 60 60 0.9000 0.9000 0.9000 1.46e-33 4om4-a1-m1-cA_4om4-a1-m1-cB
7 4om4-a1-m1-cA 60 60 0.9000 0.9000 0.9000 1.46e-33 4om4-a1-m1-cA_4om4-a1-m1-cB, 4om4-a1-m1-cA_4om4-a1-m1-cC, 4om4-a1-m1-cA_4om4-a1-m1-cE
8 4om5-a1-m1-cC 60 59 0.8833 0.8833 0.8983 5.52e-33 4om5-a1-m1-cA_4om5-a1-m1-cC
9 4om5-a1-m1-cB 60 59 0.8833 0.8833 0.8983 5.52e-33 4om5-a1-m1-cA_4om5-a1-m1-cB
10 4om5-a1-m1-cA 60 59 0.8833 0.8833 0.8983 5.52e-33 4om5-a1-m1-cA_4om5-a1-m1-cB, 4om5-a1-m1-cA_4om5-a1-m1-cC
11 1tgx-a4-m15-cC 60 60 0.8000 0.8000 0.8000 1.21e-30 1tgx-a4-m14-cB_1tgx-a4-m15-cC
12 1tgx-a4-m14-cB 60 60 0.8000 0.8000 0.8000 1.21e-30 1tgx-a4-m14-cB_1tgx-a4-m15-cC
13 1tgx-a3-m9-cA 60 60 0.8000 0.8000 0.8000 1.21e-30 1tgx-a3-m10-cB_1tgx-a3-m9-cA
14 1tgx-a3-m10-cB 60 60 0.8000 0.8000 0.8000 1.21e-30 1tgx-a3-m10-cB_1tgx-a3-m9-cA
15 1tgx-a1-m4-cC 60 60 0.8000 0.8000 0.8000 1.21e-30 1tgx-a1-m4-cA_1tgx-a1-m4-cC
16 1tgx-a1-m4-cA 60 60 0.8000 0.8000 0.8000 1.21e-30 1tgx-a1-m4-cA_1tgx-a1-m4-cC
17 1cdt-a1-m1-cB 60 60 0.7500 0.7500 0.7500 3.55e-28 1cdt-a1-m1-cA_1cdt-a1-m1-cB
18 1cdt-a1-m1-cA 60 60 0.7500 0.7500 0.7500 3.55e-28 1cdt-a1-m1-cA_1cdt-a1-m1-cB
19 3vts-a1-m1-cB 61 61 0.7333 0.7213 0.7213 1.40e-25 3vts-a1-m1-cA_3vts-a1-m1-cB
20 3vts-a1-m1-cA 61 61 0.7333 0.7213 0.7213 1.40e-25 3vts-a1-m1-cA_3vts-a1-m1-cB
21 1kxi-a1-m1-cB 62 62 0.6500 0.6290 0.6290 1.41e-19 1kxi-a1-m1-cA_1kxi-a1-m1-cB
22 1kxi-a1-m1-cA 62 62 0.6500 0.6290 0.6290 1.41e-19 1kxi-a1-m1-cA_1kxi-a1-m1-cB
23 7c28-a1-m1-cB 59 55 0.3833 0.3898 0.4182 1.63e-07 7c28-a1-m1-cB_7c28-a1-m1-cA
24 3neq-a3-m2-cA 66 65 0.4000 0.3636 0.3692 2.12e-07 3neq-a3-m1-cB_3neq-a3-m2-cA
25 3neq-a3-m1-cB 66 65 0.4000 0.3636 0.3692 2.12e-07 3neq-a3-m1-cB_3neq-a3-m2-cA
26 7c28-a1-m1-cA 65 53 0.3667 0.3385 0.4151 2.14e-07 7c28-a1-m1-cB_7c28-a1-m1-cA
27 1ff4-a2-m3-cA 65 50 0.3500 0.3231 0.4200 3.07e-07 1ff4-a2-m1-cA_1ff4-a2-m3-cA
28 1ff4-a2-m1-cA 65 50 0.3500 0.3231 0.4200 3.07e-07 1ff4-a2-m1-cA_1ff4-a2-m3-cA
29 1ff4-a1-m2-cA 65 50 0.3500 0.3231 0.4200 3.07e-07 1ff4-a1-m1-cA_1ff4-a1-m2-cA
30 1ff4-a1-m1-cA 65 50 0.3500 0.3231 0.4200 3.07e-07 1ff4-a1-m1-cA_1ff4-a1-m2-cA
31 4zqy-a2-m1-cC 65 50 0.3500 0.3231 0.4200 1.20e-06 4zqy-a2-m1-cB_4zqy-a2-m1-cC
32 4zqy-a2-m1-cB 65 50 0.3500 0.3231 0.4200 1.20e-06 4zqy-a2-m1-cB_4zqy-a2-m1-cC
33 2abx-a1-m1-cB 74 59 0.3833 0.3108 0.3898 4.60e-06 2abx-a1-m1-cA_2abx-a1-m1-cB
34 2abx-a1-m1-cA 74 59 0.3833 0.3108 0.3898 4.60e-06 2abx-a1-m1-cA_2abx-a1-m1-cB
35 4lft-a1-m1-cA 64 62 0.4333 0.4062 0.4194 6.38e-06 4lft-a1-m1-cA_4lft-a1-m1-cB
36 4do8-a3-m2-cB 66 51 0.3167 0.2879 0.3725 6.80e-06 4do8-a3-m1-cA_4do8-a3-m2-cB, 4do8-a3-m1-cB_4do8-a3-m2-cB, 4do8-a3-m2-cA_4do8-a3-m2-cB
37 4do8-a3-m2-cA 66 51 0.3167 0.2879 0.3725 6.80e-06 4do8-a3-m2-cA_4do8-a3-m2-cB
38 4do8-a3-m1-cB 66 51 0.3167 0.2879 0.3725 6.80e-06 4do8-a3-m1-cB_4do8-a3-m2-cB
39 4do8-a3-m1-cA 66 51 0.3167 0.2879 0.3725 6.80e-06 4do8-a3-m1-cA_4do8-a3-m2-cB
40 4lft-a1-m1-cB 72 62 0.4333 0.3611 0.4194 9.47e-06 4lft-a1-m1-cA_4lft-a1-m1-cB
41 3hh7-a1-m1-cB 65 58 0.3167 0.2923 0.3276 8.08e-05 3hh7-a1-m1-cA_3hh7-a1-m1-cB
42 3hh7-a1-m1-cA 65 58 0.3167 0.2923 0.3276 8.08e-05 3hh7-a1-m1-cA_3hh7-a1-m1-cB
43 5xwe-a1-m1-cB 50 48 0.2833 0.3400 0.3542 0.005 5xwe-a1-m1-cB_5xwe-a1-m1-cA
44 1v6p-a1-m1-cB 62 47 0.2833 0.2742 0.3617 0.005 1v6p-a1-m1-cA_1v6p-a1-m1-cB
45 1v6p-a1-m1-cA 62 47 0.2833 0.2742 0.3617 0.005 1v6p-a1-m1-cA_1v6p-a1-m1-cB
46 5xwe-a1-m1-cA 51 48 0.2833 0.3333 0.3542 0.006 5xwe-a1-m1-cB_5xwe-a1-m1-cA
47 6zfm-a1-m1-cE 65 59 0.3667 0.3385 0.3729 0.035 6zfm-a1-m1-cE_6zfm-a1-m1-cA
48 1qkd-a1-m1-cB 62 53 0.2833 0.2742 0.3208 0.038 1qkd-a1-m1-cA_1qkd-a1-m1-cB
49 1qkd-a1-m1-cA 62 53 0.2833 0.2742 0.3208 0.038 1qkd-a1-m1-cA_1qkd-a1-m1-cB
50 4aea-a2-m2-cB 67 64 0.3667 0.3284 0.3438 0.22 4aea-a2-m1-cB_4aea-a2-m2-cB
51 4aea-a2-m1-cB 67 64 0.3667 0.3284 0.3438 0.22 4aea-a2-m1-cB_4aea-a2-m2-cB
52 6zfm-a1-m1-cD 71 64 0.3667 0.3099 0.3438 0.30 6zfm-a1-m1-cA_6zfm-a1-m1-cD
53 6zfm-a1-m1-cA 71 64 0.3667 0.3099 0.3438 0.30 6zfm-a1-m1-cA_6zfm-a1-m1-cD, 6zfm-a1-m1-cE_6zfm-a1-m1-cA
54 2ctx-a1-m2-cA 71 64 0.3667 0.3099 0.3438 0.30 2ctx-a1-m1-cA_2ctx-a1-m2-cA
55 2ctx-a1-m1-cA 71 64 0.3667 0.3099 0.3438 0.30 2ctx-a1-m1-cA_2ctx-a1-m2-cA
56 4bdt-a2-m6-cB 61 45 0.2667 0.2623 0.3556 0.42 4bdt-a2-m4-cB_4bdt-a2-m6-cB
57 4bdt-a2-m4-cB 61 45 0.2667 0.2623 0.3556 0.42 4bdt-a2-m4-cB_4bdt-a2-m6-cB
58 1fsc-a1-m2-cA 61 45 0.2667 0.2623 0.3556 0.42 1fsc-a1-m1-cA_1fsc-a1-m2-cA
59 1fsc-a1-m1-cA 61 45 0.2667 0.2623 0.3556 0.42 1fsc-a1-m1-cA_1fsc-a1-m2-cA
60 4pcg-a1-m1-cD 263 24 0.1667 0.0380 0.4167 0.81 4pcg-a1-m1-cD_4pcg-a1-m1-cE
61 4pcg-a1-m1-cE 264 24 0.1667 0.0379 0.4167 0.81 4pcg-a1-m1-cD_4pcg-a1-m1-cE
62 2w1v-a1-m1-cB 274 25 0.1333 0.0292 0.3200 7.5 2w1v-a1-m1-cA_2w1v-a1-m1-cB
63 2w1v-a1-m1-cA 274 25 0.1333 0.0292 0.3200 7.5 2w1v-a1-m1-cA_2w1v-a1-m1-cB

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600