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HomodimerDB
>protein (length=60)
LKCNQLIPPFWKTCPKGKNLCYKMTMRAAPMVPVKRGCIDVCPKSSLLIKYMCCNTDKCN

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 1tgx-a4-m15-cC 60 60 1.0000 1.0000 1.0000 6.62e-39 1tgx-a4-m14-cB_1tgx-a4-m15-cC
2 1tgx-a4-m14-cB 60 60 1.0000 1.0000 1.0000 6.62e-39 1tgx-a4-m14-cB_1tgx-a4-m15-cC
3 1tgx-a3-m9-cA 60 60 1.0000 1.0000 1.0000 6.62e-39 1tgx-a3-m10-cB_1tgx-a3-m9-cA
4 1tgx-a3-m10-cB 60 60 1.0000 1.0000 1.0000 6.62e-39 1tgx-a3-m10-cB_1tgx-a3-m9-cA
5 1tgx-a1-m4-cC 60 60 1.0000 1.0000 1.0000 6.62e-39 1tgx-a1-m4-cA_1tgx-a1-m4-cC
6 1tgx-a1-m4-cA 60 60 1.0000 1.0000 1.0000 6.62e-39 1tgx-a1-m4-cA_1tgx-a1-m4-cC
7 1xt3-a1-m2-cB 60 60 0.8000 0.8000 0.8000 1.21e-30 1xt3-a1-m1-cA_1xt3-a1-m2-cB
8 1xt3-a1-m1-cA 60 60 0.8000 0.8000 0.8000 1.21e-30 1xt3-a1-m1-cA_1xt3-a1-m2-cB
9 4om4-a1-m1-cE 60 60 0.7333 0.7333 0.7333 1.02e-27 4om4-a1-m1-cA_4om4-a1-m1-cE, 4om4-a1-m1-cC_4om4-a1-m1-cE, 4om4-a1-m1-cD_4om4-a1-m1-cE
10 4om4-a1-m1-cD 60 60 0.7333 0.7333 0.7333 1.02e-27 4om4-a1-m1-cD_4om4-a1-m1-cE
11 4om4-a1-m1-cC 60 60 0.7333 0.7333 0.7333 1.02e-27 4om4-a1-m1-cA_4om4-a1-m1-cC, 4om4-a1-m1-cC_4om4-a1-m1-cE
12 4om4-a1-m1-cB 60 60 0.7333 0.7333 0.7333 1.02e-27 4om4-a1-m1-cA_4om4-a1-m1-cB
13 4om4-a1-m1-cA 60 60 0.7333 0.7333 0.7333 1.02e-27 4om4-a1-m1-cA_4om4-a1-m1-cB, 4om4-a1-m1-cA_4om4-a1-m1-cC, 4om4-a1-m1-cA_4om4-a1-m1-cE
14 4om5-a1-m1-cC 60 59 0.7167 0.7167 0.7288 4.74e-27 4om5-a1-m1-cA_4om5-a1-m1-cC
15 4om5-a1-m1-cB 60 59 0.7167 0.7167 0.7288 4.74e-27 4om5-a1-m1-cA_4om5-a1-m1-cB
16 4om5-a1-m1-cA 60 59 0.7167 0.7167 0.7288 4.74e-27 4om5-a1-m1-cA_4om5-a1-m1-cB, 4om5-a1-m1-cA_4om5-a1-m1-cC
17 1cdt-a1-m1-cB 60 60 0.7000 0.7000 0.7000 1.55e-26 1cdt-a1-m1-cA_1cdt-a1-m1-cB
18 1cdt-a1-m1-cA 60 60 0.7000 0.7000 0.7000 1.55e-26 1cdt-a1-m1-cA_1cdt-a1-m1-cB
19 3vts-a1-m1-cB 61 61 0.6833 0.6721 0.6721 8.51e-24 3vts-a1-m1-cA_3vts-a1-m1-cB
20 3vts-a1-m1-cA 61 61 0.6833 0.6721 0.6721 8.51e-24 3vts-a1-m1-cA_3vts-a1-m1-cB
21 1kxi-a1-m1-cB 62 62 0.6333 0.6129 0.6129 2.85e-20 1kxi-a1-m1-cA_1kxi-a1-m1-cB
22 1kxi-a1-m1-cA 62 62 0.6333 0.6129 0.6129 2.85e-20 1kxi-a1-m1-cA_1kxi-a1-m1-cB
23 3neq-a3-m2-cA 66 62 0.4167 0.3788 0.4032 7.34e-08 3neq-a3-m1-cB_3neq-a3-m2-cA
24 3neq-a3-m1-cB 66 62 0.4167 0.3788 0.4032 7.34e-08 3neq-a3-m1-cB_3neq-a3-m2-cA
25 7c28-a1-m1-cB 59 55 0.3500 0.3559 0.3818 2.13e-06 7c28-a1-m1-cB_7c28-a1-m1-cA
26 7c28-a1-m1-cA 65 50 0.3500 0.3231 0.4200 3.58e-06 7c28-a1-m1-cB_7c28-a1-m1-cA
27 4zqy-a2-m1-cC 65 50 0.3333 0.3077 0.4000 6.66e-06 4zqy-a2-m1-cB_4zqy-a2-m1-cC
28 4zqy-a2-m1-cB 65 50 0.3333 0.3077 0.4000 6.66e-06 4zqy-a2-m1-cB_4zqy-a2-m1-cC
29 4lft-a1-m1-cA 64 62 0.3833 0.3594 0.3710 1.08e-05 4lft-a1-m1-cA_4lft-a1-m1-cB
30 4lft-a1-m1-cB 72 62 0.3833 0.3194 0.3710 1.31e-05 4lft-a1-m1-cA_4lft-a1-m1-cB
31 2abx-a1-m1-cB 74 58 0.3667 0.2973 0.3793 4.66e-05 2abx-a1-m1-cA_2abx-a1-m1-cB
32 2abx-a1-m1-cA 74 58 0.3667 0.2973 0.3793 4.66e-05 2abx-a1-m1-cA_2abx-a1-m1-cB
33 4do8-a3-m2-cB 66 51 0.3333 0.3030 0.3922 1.12e-04 4do8-a3-m1-cA_4do8-a3-m2-cB, 4do8-a3-m1-cB_4do8-a3-m2-cB, 4do8-a3-m2-cA_4do8-a3-m2-cB
34 4do8-a3-m2-cA 66 51 0.3333 0.3030 0.3922 1.12e-04 4do8-a3-m2-cA_4do8-a3-m2-cB
35 4do8-a3-m1-cB 66 51 0.3333 0.3030 0.3922 1.12e-04 4do8-a3-m1-cB_4do8-a3-m2-cB
36 4do8-a3-m1-cA 66 51 0.3333 0.3030 0.3922 1.12e-04 4do8-a3-m1-cA_4do8-a3-m2-cB
37 1ff4-a2-m3-cA 65 50 0.3167 0.2923 0.3800 1.32e-04 1ff4-a2-m1-cA_1ff4-a2-m3-cA
38 1ff4-a2-m1-cA 65 50 0.3167 0.2923 0.3800 1.32e-04 1ff4-a2-m1-cA_1ff4-a2-m3-cA
39 1ff4-a1-m2-cA 65 50 0.3167 0.2923 0.3800 1.32e-04 1ff4-a1-m1-cA_1ff4-a1-m2-cA
40 1ff4-a1-m1-cA 65 50 0.3167 0.2923 0.3800 1.32e-04 1ff4-a1-m1-cA_1ff4-a1-m2-cA
41 3hh7-a1-m1-cB 65 58 0.3167 0.2923 0.3276 4.09e-04 3hh7-a1-m1-cA_3hh7-a1-m1-cB
42 3hh7-a1-m1-cA 65 58 0.3167 0.2923 0.3276 4.09e-04 3hh7-a1-m1-cA_3hh7-a1-m1-cB
43 1v6p-a1-m1-cB 62 52 0.3167 0.3065 0.3654 0.001 1v6p-a1-m1-cA_1v6p-a1-m1-cB
44 1v6p-a1-m1-cA 62 52 0.3167 0.3065 0.3654 0.001 1v6p-a1-m1-cA_1v6p-a1-m1-cB
45 1qkd-a1-m1-cB 62 53 0.3000 0.2903 0.3396 0.032 1qkd-a1-m1-cA_1qkd-a1-m1-cB
46 1qkd-a1-m1-cA 62 53 0.3000 0.2903 0.3396 0.032 1qkd-a1-m1-cA_1qkd-a1-m1-cB
47 4bdt-a2-m6-cB 61 45 0.2833 0.2787 0.3778 0.032 4bdt-a2-m4-cB_4bdt-a2-m6-cB
48 4bdt-a2-m4-cB 61 45 0.2833 0.2787 0.3778 0.032 4bdt-a2-m4-cB_4bdt-a2-m6-cB
49 1fsc-a1-m2-cA 61 45 0.2833 0.2787 0.3778 0.032 1fsc-a1-m1-cA_1fsc-a1-m2-cA
50 1fsc-a1-m1-cA 61 45 0.2833 0.2787 0.3778 0.032 1fsc-a1-m1-cA_1fsc-a1-m2-cA
51 6zfm-a1-m1-cE 65 59 0.3500 0.3231 0.3559 0.038 6zfm-a1-m1-cE_6zfm-a1-m1-cA
52 5xwe-a1-m1-cB 50 48 0.2667 0.3200 0.3333 0.051 5xwe-a1-m1-cB_5xwe-a1-m1-cA
53 5xwe-a1-m1-cA 51 48 0.2667 0.3137 0.3333 0.052 5xwe-a1-m1-cB_5xwe-a1-m1-cA
54 4aea-a2-m2-cB 67 53 0.3333 0.2985 0.3774 0.23 4aea-a2-m1-cB_4aea-a2-m2-cB
55 4aea-a2-m1-cB 67 53 0.3333 0.2985 0.3774 0.23 4aea-a2-m1-cB_4aea-a2-m2-cB
56 6zfm-a1-m1-cD 71 53 0.3333 0.2817 0.3774 0.32 6zfm-a1-m1-cA_6zfm-a1-m1-cD
57 6zfm-a1-m1-cA 71 53 0.3333 0.2817 0.3774 0.32 6zfm-a1-m1-cA_6zfm-a1-m1-cD, 6zfm-a1-m1-cE_6zfm-a1-m1-cA
58 2ctx-a1-m2-cA 71 53 0.3333 0.2817 0.3774 0.32 2ctx-a1-m1-cA_2ctx-a1-m2-cA
59 2ctx-a1-m1-cA 71 53 0.3333 0.2817 0.3774 0.32 2ctx-a1-m1-cA_2ctx-a1-m2-cA

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Reference:
Jacob Schwartz et al.

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