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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=58)
LKCYSSRTETMTCPEGEDKCEKYAVGLMHGSFFFIYTCTSKCHEGAYNVCCSTDLCNK

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 4rud-a1-m1-cB 58 58 1.0000 1.0000 1.0000 3.10e-38 4rud-a1-m1-cA_4rud-a1-m1-cB
2 4rud-a1-m1-cA 58 58 1.0000 1.0000 1.0000 3.10e-38 4rud-a1-m1-cA_4rud-a1-m1-cB
3 1kxi-a1-m1-cB 62 62 0.3621 0.3387 0.3387 0.008 1kxi-a1-m1-cA_1kxi-a1-m1-cB
4 1kxi-a1-m1-cA 62 62 0.3621 0.3387 0.3387 0.008 1kxi-a1-m1-cA_1kxi-a1-m1-cB
5 3vts-a1-m1-cB 61 63 0.3793 0.3607 0.3492 0.14 3vts-a1-m1-cA_3vts-a1-m1-cB
6 3vts-a1-m1-cA 61 63 0.3793 0.3607 0.3492 0.14 3vts-a1-m1-cA_3vts-a1-m1-cB
7 4zqy-a2-m1-cC 65 60 0.3448 0.3077 0.3333 0.29 4zqy-a2-m1-cB_4zqy-a2-m1-cC
8 4zqy-a2-m1-cB 65 60 0.3448 0.3077 0.3333 0.29 4zqy-a2-m1-cB_4zqy-a2-m1-cC
9 5xwe-a1-m1-cB 50 53 0.3448 0.4000 0.3774 0.83 5xwe-a1-m1-cB_5xwe-a1-m1-cA
10 1cdt-a1-m1-cB 60 49 0.3103 0.3000 0.3673 1.1 1cdt-a1-m1-cA_1cdt-a1-m1-cB
11 1cdt-a1-m1-cA 60 49 0.3103 0.3000 0.3673 1.1 1cdt-a1-m1-cA_1cdt-a1-m1-cB
12 3neq-a3-m2-cA 66 51 0.2931 0.2576 0.3333 1.5 3neq-a3-m1-cB_3neq-a3-m2-cA
13 3neq-a3-m1-cB 66 51 0.2931 0.2576 0.3333 1.5 3neq-a3-m1-cB_3neq-a3-m2-cA
14 8glv-a1-m1-cGn 239 32 0.1897 0.0460 0.3438 2.1 8glv-a1-m1-cGn_8glv-a1-m1-cGc
15 8glv-a1-m1-cGc 429 32 0.1897 0.0256 0.3438 2.2 8glv-a1-m1-cGn_8glv-a1-m1-cGc
16 1ff4-a2-m3-cA 65 51 0.2759 0.2462 0.3137 4.6 1ff4-a2-m1-cA_1ff4-a2-m3-cA
17 1ff4-a2-m1-cA 65 51 0.2759 0.2462 0.3137 4.6 1ff4-a2-m1-cA_1ff4-a2-m3-cA
18 1ff4-a1-m2-cA 65 51 0.2759 0.2462 0.3137 4.6 1ff4-a1-m1-cA_1ff4-a1-m2-cA
19 1ff4-a1-m1-cA 65 51 0.2759 0.2462 0.3137 4.6 1ff4-a1-m1-cA_1ff4-a1-m2-cA
20 5xwe-a1-m1-cA 51 50 0.3276 0.3725 0.3800 7.2 5xwe-a1-m1-cB_5xwe-a1-m1-cA
21 5ehm-a1-m1-cB 257 26 0.1897 0.0428 0.4231 7.7 5ehm-a1-m1-cB_5ehm-a1-m1-cA
22 5ehm-a1-m1-cA 261 26 0.1897 0.0421 0.4231 7.7 5ehm-a1-m1-cB_5ehm-a1-m1-cA

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Reference:
Jacob Schwartz et al.

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