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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=83)
LKGYSVGGGEIVEVQGGHIIRATGRKDRHSKVFTSKGPRDRRVRLSAHTAIQFYDVQDRL
GYDRPSKAVDWLIKKAKTAIDKL

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 7vp2-a1-m1-cA 83 83 1.0000 1.0000 1.0000 3.79e-56 7vp2-a1-m1-cB_7vp2-a1-m1-cA
2 7vp2-a1-m1-cB 58 58 0.6988 1.0000 1.0000 3.60e-37 7vp2-a1-m1-cB_7vp2-a1-m1-cA
3 5zkt-a1-m1-cA 54 54 0.5060 0.7778 0.7778 4.61e-24 5zkt-a1-m1-cA_5zkt-a1-m1-cB
4 5zkt-a1-m1-cB 55 54 0.5060 0.7636 0.7778 6.41e-24 5zkt-a1-m1-cA_5zkt-a1-m1-cB
5 7vp3-a4-m1-cN 62 55 0.2289 0.3065 0.3455 9.36e-06 7vp3-a4-m1-cP_7vp3-a4-m1-cN
6 7vp3-a4-m1-cP 61 55 0.2289 0.3115 0.3455 1.04e-05 7vp3-a4-m1-cP_7vp3-a4-m1-cN
7 1uaa-a1-m1-cB 633 47 0.1687 0.0221 0.2979 2.8 1uaa-a1-m1-cB_1uaa-a1-m1-cA
8 1uaa-a1-m1-cA 636 47 0.1687 0.0220 0.2979 2.8 1uaa-a1-m1-cB_1uaa-a1-m1-cA
9 2ycj-a1-m2-cA 271 49 0.1566 0.0480 0.2653 4.0 2ycj-a1-m1-cA_2ycj-a1-m2-cA
10 2ycj-a1-m1-cA 271 49 0.1566 0.0480 0.2653 4.0 2ycj-a1-m1-cA_2ycj-a1-m2-cA
11 2xky-a1-m1-cL 309 38 0.1566 0.0421 0.3421 6.8 2xky-a1-m1-cJ_2xky-a1-m1-cL
12 2xky-a1-m1-cJ 309 38 0.1566 0.0421 0.3421 6.8 2xky-a1-m1-cJ_2xky-a1-m1-cL
13 4ksf-a1-m4-cA 400 33 0.1566 0.0325 0.3939 7.7 4ksf-a1-m2-cA_4ksf-a1-m4-cA, 4ksf-a1-m3-cA_4ksf-a1-m4-cA
14 4ksf-a1-m3-cA 400 33 0.1566 0.0325 0.3939 7.7 4ksf-a1-m3-cA_4ksf-a1-m4-cA
15 4ksf-a1-m2-cA 400 33 0.1566 0.0325 0.3939 7.7 4ksf-a1-m2-cA_4ksf-a1-m4-cA

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Reference:
Jacob Schwartz et al.

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