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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=65)
LKKVEDTLTMLVNATSRQNAAIEALENRLSTLESSLKPIQDMGKVISSLNRSCAEMVAKY
DLLEH

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 6gbq-a1-m1-cA 70 65 1.0000 0.9286 1.0000 1.93e-42 6gbq-a1-m1-cD_6gbq-a1-m1-cA
2 6gbq-a1-m1-cC 69 65 1.0000 0.9420 1.0000 2.26e-42 6gbq-a1-m1-cB_6gbq-a1-m1-cC
3 6gbq-a1-m1-cB 65 65 1.0000 1.0000 1.0000 2.73e-42 6gbq-a1-m1-cB_6gbq-a1-m1-cC
4 6gbq-a1-m1-cD 68 65 1.0000 0.9559 1.0000 2.74e-42 6gbq-a1-m1-cD_6gbq-a1-m1-cA
5 6gbr-a1-m1-cB 66 65 1.0000 0.9848 1.0000 2.90e-42 6gbr-a1-m1-cB_6gbr-a1-m1-cA
6 6gbr-a1-m1-cA 67 65 1.0000 0.9701 1.0000 2.98e-42 6gbr-a1-m1-cB_6gbr-a1-m1-cA
7 6gbq-a2-m1-cF 67 62 0.9538 0.9254 1.0000 2.23e-40 6gbq-a2-m1-cH_6gbq-a2-m1-cF
8 6gbq-a2-m1-cH 63 61 0.9385 0.9683 1.0000 1.61e-39 6gbq-a2-m1-cH_6gbq-a2-m1-cF
9 5vgc-a2-m2-cA 211 47 0.2615 0.0806 0.3617 0.95 5vgc-a2-m1-cA_5vgc-a2-m2-cA, 5vgc-a2-m2-cB_5vgc-a2-m2-cA
10 5vgc-a2-m1-cA 211 47 0.2615 0.0806 0.3617 0.95 5vgc-a2-m1-cA_5vgc-a2-m2-cA
11 5vgc-a2-m2-cB 204 47 0.2615 0.0833 0.3617 0.97 5vgc-a2-m1-cB_5vgc-a2-m2-cB, 5vgc-a2-m2-cB_5vgc-a2-m2-cA
12 5vgc-a2-m1-cB 204 47 0.2615 0.0833 0.3617 0.97 5vgc-a2-m1-cB_5vgc-a2-m2-cB
13 5yk4-a1-m1-cB 767 49 0.2154 0.0183 0.2857 7.2 5yk4-a1-m1-cB_5yk4-a1-m1-cA
14 5yk4-a1-m1-cA 771 49 0.2154 0.0182 0.2857 7.2 5yk4-a1-m1-cB_5yk4-a1-m1-cA
15 3q20-a1-m1-cB 106 43 0.2000 0.1226 0.3023 9.9 3q20-a1-m1-cB_3q20-a1-m1-cA

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Reference:
Jacob Schwartz et al.

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