Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

HomodimerDB
>protein (length=65)
LKKVEDTLTMLVNATSRQNAAIEALENRLSTLESSLKPIQDMGKVISSLNRSCAEMVAKY
DLLEH

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 6gbq-a1-m1-cA 70 65 1.0000 0.9286 1.0000 1.93e-42 6gbq-a1-m1-cD_6gbq-a1-m1-cA
2 6gbq-a1-m1-cC 69 65 1.0000 0.9420 1.0000 2.26e-42 6gbq-a1-m1-cB_6gbq-a1-m1-cC
3 6gbq-a1-m1-cB 65 65 1.0000 1.0000 1.0000 2.73e-42 6gbq-a1-m1-cB_6gbq-a1-m1-cC
4 6gbq-a1-m1-cD 68 65 1.0000 0.9559 1.0000 2.74e-42 6gbq-a1-m1-cD_6gbq-a1-m1-cA
5 6gbr-a1-m1-cB 66 65 1.0000 0.9848 1.0000 2.90e-42 6gbr-a1-m1-cB_6gbr-a1-m1-cA
6 6gbr-a1-m1-cA 67 65 1.0000 0.9701 1.0000 2.98e-42 6gbr-a1-m1-cB_6gbr-a1-m1-cA
7 6gbq-a2-m1-cF 67 62 0.9538 0.9254 1.0000 2.23e-40 6gbq-a2-m1-cH_6gbq-a2-m1-cF
8 6gbq-a2-m1-cH 63 61 0.9385 0.9683 1.0000 1.61e-39 6gbq-a2-m1-cH_6gbq-a2-m1-cF
9 5vgc-a2-m2-cA 211 47 0.2615 0.0806 0.3617 0.95 5vgc-a2-m1-cA_5vgc-a2-m2-cA, 5vgc-a2-m2-cB_5vgc-a2-m2-cA
10 5vgc-a2-m1-cA 211 47 0.2615 0.0806 0.3617 0.95 5vgc-a2-m1-cA_5vgc-a2-m2-cA
11 5vgc-a2-m2-cB 204 47 0.2615 0.0833 0.3617 0.97 5vgc-a2-m1-cB_5vgc-a2-m2-cB, 5vgc-a2-m2-cB_5vgc-a2-m2-cA
12 5vgc-a2-m1-cB 204 47 0.2615 0.0833 0.3617 0.97 5vgc-a2-m1-cB_5vgc-a2-m2-cB
13 5yk4-a1-m1-cB 767 49 0.2154 0.0183 0.2857 7.2 5yk4-a1-m1-cB_5yk4-a1-m1-cA
14 5yk4-a1-m1-cA 771 49 0.2154 0.0182 0.2857 7.2 5yk4-a1-m1-cB_5yk4-a1-m1-cA
15 3q20-a1-m1-cB 106 43 0.2000 0.1226 0.3023 9.9 3q20-a1-m1-cB_3q20-a1-m1-cA

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600