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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=66)
LKKVEDTLTMLVNATSRQNAAIEALENRLSTLESSLKPIQDMGKVISSLNRSCAEMVAKY
DLLEHH

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 6gbr-a1-m1-cB 66 66 1.0000 1.0000 1.0000 1.96e-43 6gbr-a1-m1-cB_6gbr-a1-m1-cA
2 6gbq-a1-m1-cD 68 66 1.0000 0.9706 1.0000 2.47e-43 6gbq-a1-m1-cD_6gbq-a1-m1-cA
3 6gbq-a1-m1-cA 70 66 1.0000 0.9429 1.0000 2.70e-43 6gbq-a1-m1-cD_6gbq-a1-m1-cA
4 6gbr-a1-m1-cA 67 66 1.0000 0.9851 1.0000 2.74e-43 6gbr-a1-m1-cB_6gbr-a1-m1-cA
5 6gbq-a1-m1-cC 69 66 1.0000 0.9565 1.0000 3.03e-43 6gbq-a1-m1-cB_6gbq-a1-m1-cC
6 6gbq-a1-m1-cB 65 65 0.9848 1.0000 1.0000 2.94e-42 6gbq-a1-m1-cB_6gbq-a1-m1-cC
7 6gbq-a2-m1-cF 67 63 0.9545 0.9403 1.0000 3.08e-41 6gbq-a2-m1-cH_6gbq-a2-m1-cF
8 6gbq-a2-m1-cH 63 62 0.9394 0.9841 1.0000 1.50e-40 6gbq-a2-m1-cH_6gbq-a2-m1-cF
9 5vgc-a2-m2-cB 204 47 0.2576 0.0833 0.3617 0.93 5vgc-a2-m1-cB_5vgc-a2-m2-cB, 5vgc-a2-m2-cB_5vgc-a2-m2-cA
10 5vgc-a2-m1-cB 204 47 0.2576 0.0833 0.3617 0.93 5vgc-a2-m1-cB_5vgc-a2-m2-cB
11 5vgc-a2-m2-cA 211 47 0.2576 0.0806 0.3617 0.94 5vgc-a2-m1-cA_5vgc-a2-m2-cA, 5vgc-a2-m2-cB_5vgc-a2-m2-cA
12 5vgc-a2-m1-cA 211 47 0.2576 0.0806 0.3617 0.94 5vgc-a2-m1-cA_5vgc-a2-m2-cA

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Reference:
Jacob Schwartz et al.

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