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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=67)
LKKVEDTLTMLVNATSRQNAAIEALENRLSTLESSLKPIQDMGKVISSLNRSCAEMVAKY
DLLEHHH

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 6gbq-a1-m1-cD 68 67 1.0000 0.9853 1.0000 2.43e-44 6gbq-a1-m1-cD_6gbq-a1-m1-cA
2 6gbr-a1-m1-cA 67 67 1.0000 1.0000 1.0000 2.50e-44 6gbr-a1-m1-cB_6gbr-a1-m1-cA
3 6gbq-a1-m1-cC 69 67 1.0000 0.9710 1.0000 3.87e-44 6gbq-a1-m1-cB_6gbq-a1-m1-cC
4 6gbq-a1-m1-cA 70 67 1.0000 0.9571 1.0000 3.98e-44 6gbq-a1-m1-cD_6gbq-a1-m1-cA
5 6gbr-a1-m1-cB 66 66 0.9851 1.0000 1.0000 2.78e-43 6gbr-a1-m1-cB_6gbr-a1-m1-cA
6 6gbq-a1-m1-cB 65 65 0.9701 1.0000 1.0000 3.07e-42 6gbq-a1-m1-cB_6gbq-a1-m1-cC
7 6gbq-a2-m1-cF 67 64 0.9552 0.9552 1.0000 4.86e-42 6gbq-a2-m1-cH_6gbq-a2-m1-cF
8 6gbq-a2-m1-cH 63 63 0.9403 1.0000 1.0000 1.72e-41 6gbq-a2-m1-cH_6gbq-a2-m1-cF
9 5vgc-a2-m2-cA 211 47 0.2537 0.0806 0.3617 0.93 5vgc-a2-m1-cA_5vgc-a2-m2-cA, 5vgc-a2-m2-cB_5vgc-a2-m2-cA
10 5vgc-a2-m1-cA 211 47 0.2537 0.0806 0.3617 0.93 5vgc-a2-m1-cA_5vgc-a2-m2-cA
11 5vgc-a2-m2-cB 204 47 0.2537 0.0833 0.3617 0.94 5vgc-a2-m1-cB_5vgc-a2-m2-cB, 5vgc-a2-m2-cB_5vgc-a2-m2-cA
12 5vgc-a2-m1-cB 204 47 0.2537 0.0833 0.3617 0.94 5vgc-a2-m1-cB_5vgc-a2-m2-cB

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Reference:
Jacob Schwartz et al.

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