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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=70)
LKKVEDTLTMLVNATSRQNAAIEALENRLSTLESSLKPIQDMGKVISSLNRSCAEMVAKY
DLLEHHHHHH

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 6gbq-a1-m1-cA 70 70 1.0000 1.0000 1.0000 1.48e-46 6gbq-a1-m1-cD_6gbq-a1-m1-cA
2 6gbq-a1-m1-cC 69 69 0.9857 1.0000 1.0000 9.20e-46 6gbq-a1-m1-cB_6gbq-a1-m1-cC
3 6gbq-a2-m1-cF 67 67 0.9571 1.0000 1.0000 1.79e-44 6gbq-a2-m1-cH_6gbq-a2-m1-cF
4 6gbr-a1-m1-cA 67 67 0.9571 1.0000 1.0000 4.16e-44 6gbr-a1-m1-cB_6gbr-a1-m1-cA
5 6gbq-a1-m1-cD 68 67 0.9571 0.9853 1.0000 4.37e-44 6gbq-a1-m1-cD_6gbq-a1-m1-cA
6 6gbr-a1-m1-cB 66 66 0.9429 1.0000 1.0000 2.86e-43 6gbr-a1-m1-cB_6gbr-a1-m1-cA
7 6gbq-a1-m1-cB 65 65 0.9286 1.0000 1.0000 2.08e-42 6gbq-a1-m1-cB_6gbq-a1-m1-cC
8 6gbq-a2-m1-cH 63 63 0.9000 1.0000 1.0000 2.52e-41 6gbq-a2-m1-cH_6gbq-a2-m1-cF
9 4z6k-a1-m1-cC 345 35 0.1571 0.0319 0.3143 0.066 4z6k-a1-m1-cD_4z6k-a1-m1-cC
10 4z6k-a1-m1-cA 345 35 0.1571 0.0319 0.3143 0.066 4z6k-a1-m1-cD_4z6k-a1-m1-cA
11 5vgc-a2-m2-cA 211 47 0.2429 0.0806 0.3617 0.93 5vgc-a2-m1-cA_5vgc-a2-m2-cA, 5vgc-a2-m2-cB_5vgc-a2-m2-cA
12 5vgc-a2-m1-cA 211 47 0.2429 0.0806 0.3617 0.93 5vgc-a2-m1-cA_5vgc-a2-m2-cA
13 5vgc-a2-m2-cB 204 47 0.2429 0.0833 0.3617 0.96 5vgc-a2-m1-cB_5vgc-a2-m2-cB, 5vgc-a2-m2-cB_5vgc-a2-m2-cA
14 5vgc-a2-m1-cB 204 47 0.2429 0.0833 0.3617 0.96 5vgc-a2-m1-cB_5vgc-a2-m2-cB
15 5c74-a1-m1-cB 144 54 0.2571 0.1250 0.3333 4.0 5c74-a1-m1-cB_5c74-a1-m1-cA
16 5c74-a1-m1-cA 211 11 0.1286 0.0427 0.8182 4.0 5c74-a1-m1-cB_5c74-a1-m1-cA
17 3h5a-a1-m1-cD 350 22 0.1429 0.0286 0.4545 6.3 3h5a-a1-m1-cD_3h5a-a1-m1-cA, 3h5a-a1-m1-cD_3h5a-a1-m1-cB
18 6iog-a1-m1-cB 374 26 0.1429 0.0267 0.3846 7.3 6iog-a1-m1-cA_6iog-a1-m1-cB
19 6z68-a1-m1-cA 363 30 0.1571 0.0303 0.3667 9.2 6z68-a1-m1-cB_6z68-a1-m1-cA
20 5m48-a1-m2-cA 108 63 0.2857 0.1852 0.3175 9.8 5m48-a1-m1-cA_5m48-a1-m2-cA
21 5m48-a1-m1-cA 108 63 0.2857 0.1852 0.3175 9.8 5m48-a1-m1-cA_5m48-a1-m2-cA

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Reference:
Jacob Schwartz et al.

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