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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=71)
LKNLVLDIDYNDAVVVIHTSPGAAQLIARLLDSLGKAEGILGTIAGDDTIFTTPANGFTV
KDLYEAILELF

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 1xxb-a1-m1-cF 71 71 1.0000 1.0000 1.0000 1.07e-45 1xxb-a1-m1-cE_1xxb-a1-m1-cF
2 1xxb-a1-m1-cE 71 71 1.0000 1.0000 1.0000 1.07e-45 1xxb-a1-m1-cE_1xxb-a1-m1-cF
3 1xxb-a1-m1-cD 71 71 1.0000 1.0000 1.0000 1.07e-45 1xxb-a1-m1-cA_1xxb-a1-m1-cD
4 1xxb-a1-m1-cA 71 71 1.0000 1.0000 1.0000 1.07e-45 1xxb-a1-m1-cA_1xxb-a1-m1-cD
5 3v4g-a1-m6-cA 145 71 0.6620 0.3241 0.6620 3.81e-30 3v4g-a1-m2-cA_3v4g-a1-m6-cA, 3v4g-a1-m5-cA_3v4g-a1-m6-cA
6 3v4g-a1-m5-cA 145 71 0.6620 0.3241 0.6620 3.81e-30 3v4g-a1-m5-cA_3v4g-a1-m6-cA
7 3v4g-a1-m2-cA 145 71 0.6620 0.3241 0.6620 3.81e-30 3v4g-a1-m2-cA_3v4g-a1-m6-cA
8 5cj9-a1-m3-cA 146 44 0.3099 0.1507 0.5000 1.27e-05 5cj9-a1-m2-cA_5cj9-a1-m3-cA
9 5cj9-a1-m2-cA 146 44 0.3099 0.1507 0.5000 1.27e-05 5cj9-a1-m2-cA_5cj9-a1-m3-cA
10 3cag-a2-m1-cC 79 68 0.3239 0.2911 0.3382 4.78e-05 3cag-a2-m1-cB_3cag-a2-m1-cC
11 3cag-a2-m1-cB 79 68 0.3239 0.2911 0.3382 4.78e-05 3cag-a2-m1-cB_3cag-a2-m1-cC
12 3bue-a1-m1-cF 78 68 0.3239 0.2949 0.3382 5.39e-05 3bue-a1-m1-cA_3bue-a1-m1-cF
13 3bue-a1-m1-cA 78 68 0.3239 0.2949 0.3382 5.39e-05 3bue-a1-m1-cA_3bue-a1-m1-cF
14 3lap-a1-m1-cB 149 68 0.3239 0.1544 0.3382 1.23e-04 3lap-a1-m1-cB_3lap-a1-m1-cF
15 3lap-a1-m1-cA 149 68 0.3239 0.1544 0.3382 1.23e-04 3lap-a1-m1-cA_3lap-a1-m1-cF
16 3lap-a1-m1-cF 154 68 0.3239 0.1494 0.3382 1.28e-04 3lap-a1-m1-cA_3lap-a1-m1-cF, 3lap-a1-m1-cB_3lap-a1-m1-cF, 3lap-a1-m1-cE_3lap-a1-m1-cF
17 3lap-a1-m1-cE 154 68 0.3239 0.1494 0.3382 1.28e-04 3lap-a1-m1-cE_3lap-a1-m1-cF
18 3fhz-a1-m1-cB 161 68 0.3239 0.1429 0.3382 1.32e-04 3fhz-a1-m1-cA_3fhz-a1-m1-cB, 3fhz-a1-m1-cE_3fhz-a1-m1-cB, 3fhz-a1-m1-cF_3fhz-a1-m1-cB
19 3ere-a1-m2-cD 156 68 0.3239 0.1474 0.3382 1.34e-04 3ere-a1-m1-cD_3ere-a1-m2-cD
20 3ere-a1-m1-cD 156 68 0.3239 0.1474 0.3382 1.34e-04 3ere-a1-m1-cD_3ere-a1-m2-cD
21 3fhz-a1-m1-cF 155 68 0.3239 0.1484 0.3382 1.36e-04 3fhz-a1-m1-cF_3fhz-a1-m1-cB
22 3fhz-a1-m1-cE 155 68 0.3239 0.1484 0.3382 1.36e-04 3fhz-a1-m1-cE_3fhz-a1-m1-cB, 3fhz-a1-m1-cE_3fhz-a1-m1-cD
23 3fhz-a1-m1-cA 155 68 0.3239 0.1484 0.3382 1.36e-04 3fhz-a1-m1-cA_3fhz-a1-m1-cB
24 3fhz-a1-m1-cD 166 68 0.3239 0.1386 0.3382 1.39e-04 3fhz-a1-m1-cE_3fhz-a1-m1-cD
25 5ur2-a4-m2-cD 959 64 0.2394 0.0177 0.2656 6.3 5ur2-a4-m1-cC_5ur2-a4-m2-cD, 5ur2-a4-m2-cC_5ur2-a4-m2-cD
26 5ur2-a4-m2-cC 958 64 0.2394 0.0177 0.2656 6.4 5ur2-a4-m2-cC_5ur2-a4-m2-cD
27 5ur2-a4-m1-cC 958 64 0.2394 0.0177 0.2656 6.4 5ur2-a4-m1-cC_5ur2-a4-m2-cD
28 5u0l-a1-m1-cB 487 27 0.1268 0.0185 0.3333 6.7 5u0l-a1-m1-cB_5u0l-a1-m1-cA
29 5u0l-a1-m1-cA 488 27 0.1268 0.0184 0.3333 6.7 5u0l-a1-m1-cB_5u0l-a1-m1-cA
30 8hav-a1-m1-cB 399 28 0.1127 0.0201 0.2857 6.9 8hav-a1-m1-cA_8hav-a1-m1-cB
31 8hav-a1-m1-cA 399 28 0.1127 0.0201 0.2857 6.9 8hav-a1-m1-cA_8hav-a1-m1-cB
32 8haw-a1-m1-cB 478 28 0.1127 0.0167 0.2857 7.0 8haw-a1-m1-cA_8haw-a1-m1-cB
33 8haw-a1-m1-cA 478 28 0.1127 0.0167 0.2857 7.0 8haw-a1-m1-cA_8haw-a1-m1-cB
34 5vcs-a1-m1-cB 323 27 0.1972 0.0433 0.5185 9.8 5vcs-a1-m1-cB_5vcs-a1-m1-cA
35 5vcs-a1-m1-cA 354 27 0.1972 0.0395 0.5185 9.8 5vcs-a1-m1-cB_5vcs-a1-m1-cA

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Reference:
Jacob Schwartz et al.

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