Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=85)
LKPPSMYKVILVNDDYTPMEFVIDVLQKFFSYDVERATQLMLAVHYQGKAICGVFTAEVA
ETKVAMVNKYARENEHPLLCTLEKA

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3o2o-a7-m1-cH 85 85 1.0000 1.0000 1.0000 3.58e-60 3o2o-a7-m1-cG_3o2o-a7-m1-cH
2 3o2o-a7-m1-cG 85 85 1.0000 1.0000 1.0000 3.58e-60 3o2o-a7-m1-cG_3o2o-a7-m1-cH
3 3o2o-a6-m1-cG 85 85 1.0000 1.0000 1.0000 3.58e-60 3o2o-a6-m1-cF_3o2o-a6-m1-cG
4 3o2o-a6-m1-cF 85 85 1.0000 1.0000 1.0000 3.58e-60 3o2o-a6-m1-cF_3o2o-a6-m1-cG
5 3g1b-a1-m1-cB 81 80 0.5412 0.5679 0.5750 5.60e-30 3g1b-a1-m1-cA_3g1b-a1-m1-cB
6 3g1b-a1-m1-cA 80 79 0.5294 0.5625 0.5696 2.98e-29 3g1b-a1-m1-cA_3g1b-a1-m1-cB
7 4yjm-a5-m3-cA 85 83 0.3765 0.3765 0.3855 9.81e-15 4yjm-a5-m1-cB_4yjm-a5-m3-cA, 4yjm-a5-m2-cC_4yjm-a5-m3-cA
8 4yjm-a5-m2-cC 83 80 0.3647 0.3735 0.3875 2.31e-14 4yjm-a5-m2-cC_4yjm-a5-m3-cA
9 4yjm-a5-m1-cB 84 80 0.3647 0.3690 0.3875 2.37e-14 4yjm-a5-m1-cB_4yjm-a5-m3-cA
10 7d34-a1-m1-cB 79 62 0.2706 0.2911 0.3710 3.03e-04 7d34-a1-m1-cA_7d34-a1-m1-cB
11 7d34-a1-m1-cA 79 62 0.2706 0.2911 0.3710 3.03e-04 7d34-a1-m1-cA_7d34-a1-m1-cB
12 7vyj-a1-m1-cA 675 61 0.2235 0.0281 0.3115 1.8 7vyj-a1-m1-cA_7vyj-a1-m1-cB
13 7vyj-a1-m1-cB 679 61 0.2235 0.0280 0.3115 1.8 7vyj-a1-m1-cA_7vyj-a1-m1-cB
14 1yx1-a1-m1-cC 248 21 0.1176 0.0403 0.4762 2.7 1yx1-a1-m1-cA_1yx1-a1-m1-cC
15 1yx1-a1-m1-cA 248 21 0.1176 0.0403 0.4762 2.7 1yx1-a1-m1-cA_1yx1-a1-m1-cC
16 4wzu-a1-m2-cA 358 24 0.1294 0.0307 0.4583 6.1 4wzu-a1-m1-cA_4wzu-a1-m2-cA
17 4wzu-a1-m1-cA 358 24 0.1294 0.0307 0.4583 6.1 4wzu-a1-m1-cA_4wzu-a1-m2-cA

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600