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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=85)
LLGTHGGTVFTTVEDLGSKILLTCSLDDSATEVTGHRWLKGGVVLKEDALPGQKTEFKVD
SDDQWGEYSCVFLPEPMGTANIQLH

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3i84-a2-m2-cB 85 85 1.0000 1.0000 1.0000 7.74e-59 3i84-a2-m1-cA_3i84-a2-m2-cB, 3i84-a2-m1-cB_3i84-a2-m2-cB, 3i84-a2-m2-cA_3i84-a2-m2-cB
2 3i84-a2-m1-cB 85 85 1.0000 1.0000 1.0000 7.74e-59 3i84-a2-m1-cB_3i84-a2-m2-cB
3 3i84-a2-m2-cA 79 79 0.9176 0.9873 0.9873 9.54e-52 3i84-a2-m2-cA_3i84-a2-m2-cB
4 3i84-a2-m1-cA 79 79 0.9176 0.9873 0.9873 9.54e-52 3i84-a2-m1-cA_3i84-a2-m2-cB
5 1i7q-a1-m1-cC 517 56 0.2118 0.0348 0.3214 0.31 1i7q-a1-m1-cA_1i7q-a1-m1-cC
6 1i7q-a1-m1-cA 517 56 0.2118 0.0348 0.3214 0.31 1i7q-a1-m1-cA_1i7q-a1-m1-cC
7 1c7s-a1-m2-cA 858 51 0.1882 0.0186 0.3137 1.9 1c7s-a1-m1-cA_1c7s-a1-m2-cA
8 1c7s-a1-m1-cA 858 51 0.1882 0.0186 0.3137 1.9 1c7s-a1-m1-cA_1c7s-a1-m2-cA
9 3sqv-a3-m1-cB 606 33 0.1529 0.0215 0.3939 3.6 3sqv-a3-m1-cA_3sqv-a3-m1-cB
10 3sqv-a3-m1-cA 606 33 0.1529 0.0215 0.3939 3.6 3sqv-a3-m1-cA_3sqv-a3-m1-cB
11 3naw-a3-m1-cA 607 33 0.1529 0.0214 0.3939 3.6 3naw-a3-m1-cA_3naw-a3-m1-cB
12 3naw-a3-m1-cB 610 33 0.1529 0.0213 0.3939 3.6 3naw-a3-m1-cA_3naw-a3-m1-cB
13 4eq7-a3-m1-cB 313 20 0.0941 0.0256 0.4000 7.3 4eq7-a3-m1-cA_4eq7-a3-m1-cB
14 4eq7-a3-m1-cA 313 20 0.0941 0.0256 0.4000 7.3 4eq7-a3-m1-cA_4eq7-a3-m1-cB

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Reference:
Jacob Schwartz et al.

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