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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=60)
LLSKKVMNFAYGMGAAVVIVGALFKITHFEIGPLTGTVMLSIGLLTEALIFALSAFEPVE

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 6ys8-a1-m1-cG 60 60 1.0000 1.0000 1.0000 1.36e-36 6ys8-a1-m1-cF_6ys8-a1-m1-cG
2 6ys8-a1-m1-cF 60 60 1.0000 1.0000 1.0000 1.36e-36 6ys8-a1-m1-cF_6ys8-a1-m1-cG
3 7saz-a1-m1-cF 57 57 0.5167 0.5439 0.5439 3.39e-11 7saz-a1-m1-cE_7saz-a1-m1-cF
4 7saz-a1-m1-cE 56 56 0.5000 0.5357 0.5357 2.78e-10 7saz-a1-m1-cE_7saz-a1-m1-cF
5 7sat-a1-m1-cF 77 54 0.4167 0.3247 0.4630 6.38e-10 7sat-a1-m1-cF_7sat-a1-m1-cE
6 7sat-a1-m1-cE 80 54 0.4167 0.3125 0.4630 7.46e-10 7sat-a1-m1-cF_7sat-a1-m1-cE
7 7sau-a1-m1-cE 72 58 0.5333 0.4444 0.5517 9.11e-10 7sau-a1-m1-cF_7sau-a1-m1-cE
8 7sau-a1-m1-cF 71 58 0.5333 0.4507 0.5517 1.05e-09 7sau-a1-m1-cF_7sau-a1-m1-cE
9 7sax-a1-m1-cC 60 54 0.3500 0.3500 0.3889 3.25e-04 7sax-a1-m1-cG_7sax-a1-m1-cC
10 7sax-a1-m1-cG 50 43 0.3167 0.3800 0.4419 7.03e-04 7sax-a1-m1-cG_7sax-a1-m1-cC
11 4az1-a1-m1-cB 292 37 0.2000 0.0411 0.3243 0.92 4az1-a1-m1-cB_4az1-a1-m1-cA
12 4az1-a1-m1-cA 294 37 0.2000 0.0408 0.3243 0.92 4az1-a1-m1-cB_4az1-a1-m1-cA
13 3o0h-a1-m1-cB 459 45 0.2333 0.0305 0.3111 3.8 3o0h-a1-m1-cA_3o0h-a1-m1-cB
14 3o0h-a1-m1-cA 455 45 0.2333 0.0308 0.3111 4.1 3o0h-a1-m1-cA_3o0h-a1-m1-cB
15 4rpa-a2-m2-cB 306 39 0.2000 0.0392 0.3077 8.5 4rpa-a2-m1-cA_4rpa-a2-m2-cB, 4rpa-a2-m2-cA_4rpa-a2-m2-cB
16 4rpa-a2-m2-cA 306 39 0.2000 0.0392 0.3077 8.5 4rpa-a2-m2-cA_4rpa-a2-m2-cB
17 4rpa-a2-m1-cA 306 39 0.2000 0.0392 0.3077 8.5 4rpa-a2-m1-cA_4rpa-a2-m2-cB

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Reference:
Jacob Schwartz et al.

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