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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=81)
LMADFTKWFVTGDGGIMEEFTEETLRHLLWDVWQRHQREEAERKRKAEEEESWRLAREHL
THRLQVKYFYRWREKARALAT

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 4wpx-a1-m1-cE 81 81 1.0000 1.0000 1.0000 1.23e-53 4wpx-a1-m1-cB_4wpx-a1-m1-cE
2 4wpx-a1-m1-cB 81 81 1.0000 1.0000 1.0000 1.23e-53 4wpx-a1-m1-cB_4wpx-a1-m1-cE
3 3qke-a4-m1-cF 396 68 0.2716 0.0556 0.3235 1.5 3qke-a4-m1-cF_3qke-a4-m1-cG
4 3qke-a4-m1-cG 397 68 0.2716 0.0554 0.3235 1.5 3qke-a4-m1-cF_3qke-a4-m1-cG
5 3ow1-a5-m1-cB 388 68 0.2716 0.0567 0.3235 1.5 3ow1-a5-m1-cG_3ow1-a5-m1-cB
6 3ow1-a5-m1-cA 384 68 0.2716 0.0573 0.3235 1.6 3ow1-a5-m1-cG_3ow1-a5-m1-cA
7 3ow1-a5-m1-cG 383 68 0.2716 0.0574 0.3235 1.6 3ow1-a5-m1-cG_3ow1-a5-m1-cA, 3ow1-a5-m1-cG_3ow1-a5-m1-cB
8 8dgf-a1-m1-cC 1540 38 0.0988 0.0052 0.2105 1.7 8dgf-a1-m1-cD_8dgf-a1-m1-cC
9 8dgf-a1-m1-cD 1534 38 0.0988 0.0052 0.2105 1.7 8dgf-a1-m1-cD_8dgf-a1-m1-cC
10 2ykf-a1-m2-cA 263 33 0.1605 0.0494 0.3939 4.4 2ykf-a1-m1-cA_2ykf-a1-m2-cA
11 2ykf-a1-m1-cA 263 33 0.1605 0.0494 0.3939 4.4 2ykf-a1-m1-cA_2ykf-a1-m2-cA
12 6dhi-a2-m1-cD 405 34 0.1235 0.0247 0.2941 7.8 6dhi-a2-m1-cD_6dhi-a2-m1-cB
13 6dhi-a2-m1-cB 430 34 0.1235 0.0233 0.2941 7.8 6dhi-a2-m1-cD_6dhi-a2-m1-cB
14 4dql-a3-m2-cB 379 35 0.1605 0.0343 0.3714 8.5 4dql-a3-m1-cA_4dql-a3-m2-cB
15 4dql-a3-m1-cA 378 35 0.1605 0.0344 0.3714 8.8 4dql-a3-m1-cA_4dql-a3-m2-cB
16 6p74-a1-m2-cA 512 35 0.1481 0.0234 0.3429 9.0 6p74-a1-m1-cA_6p74-a1-m2-cA
17 6p74-a1-m1-cA 512 35 0.1481 0.0234 0.3429 9.0 6p74-a1-m1-cA_6p74-a1-m2-cA
18 3v4b-a1-m8-cA 384 55 0.2469 0.0521 0.3636 9.3 3v4b-a1-m1-cA_3v4b-a1-m8-cA, 3v4b-a1-m3-cA_3v4b-a1-m8-cA, 3v4b-a1-m6-cA_3v4b-a1-m8-cA
19 3v4b-a1-m6-cA 384 55 0.2469 0.0521 0.3636 9.3 3v4b-a1-m6-cA_3v4b-a1-m8-cA
20 3v4b-a1-m3-cA 384 55 0.2469 0.0521 0.3636 9.3 3v4b-a1-m3-cA_3v4b-a1-m8-cA
21 3v4b-a1-m1-cA 384 55 0.2469 0.0521 0.3636 9.3 3v4b-a1-m1-cA_3v4b-a1-m8-cA
22 3tr5-a1-m1-cD 496 25 0.0988 0.0161 0.3200 9.5 3tr5-a1-m1-cC_3tr5-a1-m1-cD
23 3tr5-a1-m1-cC 495 25 0.0988 0.0162 0.3200 9.8 3tr5-a1-m1-cC_3tr5-a1-m1-cD
24 3tr5-a1-m1-cB 496 25 0.0988 0.0161 0.3200 10.0 3tr5-a1-m1-cB_3tr5-a1-m1-cA

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Reference:
Jacob Schwartz et al.

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