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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=83)
LNKLVEHIKELLQQLNKNWHRHQGNLHDNQQEQLFQEFQHFKLQNIHEQQFNQVDNHLQS
ESDTVHHFHNKLQELNNFHHLVH

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3vjf-a1-m1-cB 83 83 1.0000 1.0000 1.0000 7.13e-51 3vjf-a1-m1-cB_3vjf-a1-m1-cA
2 3vjf-a1-m1-cA 92 90 1.0000 0.9022 0.9222 3.35e-48 3vjf-a1-m1-cB_3vjf-a1-m1-cA
3 6kos-a1-m1-cA 101 97 0.9036 0.7426 0.7732 3.86e-34 6kos-a1-m1-cB_6kos-a1-m1-cA
4 6kos-a1-m1-cB 97 96 0.8916 0.7629 0.7708 2.03e-33 6kos-a1-m1-cB_6kos-a1-m1-cA
5 1igw-a1-m1-cB 411 65 0.2410 0.0487 0.3077 2.4 1igw-a1-m1-cD_1igw-a1-m1-cB
6 1igw-a1-m1-cC 416 65 0.2410 0.0481 0.3077 2.4 1igw-a1-m1-cD_1igw-a1-m1-cC
7 5ufn-a3-m1-cB 222 34 0.1205 0.0450 0.2941 2.4 5ufn-a3-m1-cB_5ufn-a3-m1-cA
8 3o5v-a3-m1-cA 130 48 0.1446 0.0923 0.2500 3.1 3o5v-a3-m1-cB_3o5v-a3-m1-cA

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Reference:
Jacob Schwartz et al.

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