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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=58)
LNRIKVVLAEKQRTNRWLAEQGKSENTISRWCSNKSQPSLDLVKVAELLNVDPRQLIN

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3bs3-a1-m2-cA 58 58 1.0000 1.0000 1.0000 1.64e-36 3bs3-a1-m1-cA_3bs3-a1-m2-cA
2 3bs3-a1-m1-cA 58 58 1.0000 1.0000 1.0000 1.64e-36 3bs3-a1-m1-cA_3bs3-a1-m2-cA
3 3omt-a1-m1-cB 67 59 0.5690 0.4925 0.5593 1.51e-15 3omt-a1-m1-cB_3omt-a1-m1-cA
4 3omt-a1-m1-cA 68 59 0.5690 0.4853 0.5593 1.54e-15 3omt-a1-m1-cB_3omt-a1-m1-cA
5 3t33-a2-m2-cA 407 37 0.1724 0.0246 0.2703 0.79 3t33-a2-m1-cA_3t33-a2-m2-cA
6 3t33-a2-m1-cA 407 37 0.1724 0.0246 0.2703 0.79 3t33-a2-m1-cA_3t33-a2-m2-cA
7 4ucz-a1-m1-cA 381 39 0.2241 0.0341 0.3333 3.7 4ucz-a1-m1-cB_4ucz-a1-m1-cA
8 8dfm-a1-m1-cB 446 25 0.1379 0.0179 0.3200 5.3 8dfm-a1-m1-cA_8dfm-a1-m1-cB
9 8dfm-a1-m1-cA 441 25 0.1379 0.0181 0.3200 5.6 8dfm-a1-m1-cA_8dfm-a1-m1-cB
10 1tmf-a1-m9-c4 31 30 0.1897 0.3548 0.3667 10.0 1tmf-a1-m8-c4_1tmf-a1-m9-c4
11 1tmf-a1-m8-c4 31 30 0.1897 0.3548 0.3667 10.0 1tmf-a1-m8-c4_1tmf-a1-m9-c4

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Reference:
Jacob Schwartz et al.

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