Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=96)
LNSRAISPWRYELDRDLNRLPQDLYHARCLCPHCVSLQTGSHMDPRGNSELLYHNQTVFY
RRPCHGEKGTHKGYCLERRLYRVSLACVCVRPRVMG

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 7uwk-a1-m1-cE 96 96 1.0000 1.0000 1.0000 2.14e-68 7uwk-a1-m1-cE_7uwk-a1-m1-cG
2 7uwk-a1-m1-cG 100 96 1.0000 0.9600 1.0000 3.05e-68 7uwk-a1-m1-cE_7uwk-a1-m1-cG
3 1jpy-a1-m1-cB 121 92 0.2917 0.2314 0.3043 1.46e-06 1jpy-a1-m1-cA_1jpy-a1-m1-cB
4 1jpy-a1-m1-cA 121 92 0.2917 0.2314 0.3043 1.46e-06 1jpy-a1-m1-cA_1jpy-a1-m1-cB
5 5vb9-a1-m2-cA 108 92 0.2812 0.2500 0.2935 4.26e-04 5vb9-a1-m1-cA_5vb9-a1-m2-cA
6 5vb9-a1-m1-cA 108 92 0.2812 0.2500 0.2935 4.26e-04 5vb9-a1-m1-cA_5vb9-a1-m2-cA
7 6wir-a1-m2-cC 89 92 0.2812 0.3034 0.2935 8.66e-04 6wir-a1-m1-cC_6wir-a1-m2-cC
8 6wir-a1-m1-cC 89 92 0.2812 0.3034 0.2935 8.66e-04 6wir-a1-m1-cC_6wir-a1-m2-cC
9 2vxs-a2-m1-cA 86 92 0.2604 0.2907 0.2717 0.22 2vxs-a2-m1-cB_2vxs-a2-m1-cA
10 3lid-a3-m1-cB 276 88 0.2812 0.0978 0.3068 8.1 3lid-a3-m1-cB_3lid-a3-m1-cA
11 3lid-a3-m1-cA 279 88 0.2812 0.0968 0.3068 8.3 3lid-a3-m1-cB_3lid-a3-m1-cA

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600