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TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=36)
LNYFNINYFKDAASNGASKLEFTQDPSKFTDPVKDV

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3vdd-a1-m9-cD 36 36 1.0000 1.0000 1.0000 1.16e-20 3vdd-a1-m8-cD_3vdd-a1-m9-cD
2 3vdd-a1-m8-cD 36 36 1.0000 1.0000 1.0000 1.16e-20 3vdd-a1-m8-cD_3vdd-a1-m9-cD
3 1po2-a1-m9-c4 62 36 0.6667 0.3871 0.6667 7.54e-14 1po2-a1-m8-c4_1po2-a1-m9-c4
4 1po2-a1-m8-c4 62 36 0.6667 0.3871 0.6667 7.54e-14 1po2-a1-m8-c4_1po2-a1-m9-c4
5 6q0b-a1-m9-c4 68 36 0.6667 0.3529 0.6667 1.02e-13 6q0b-a1-m8-c4_6q0b-a1-m9-c4
6 6q0b-a1-m8-c4 68 36 0.6667 0.3529 0.6667 1.02e-13 6q0b-a1-m8-c4_6q0b-a1-m9-c4
7 1hxs-a1-m9-c4 68 36 0.6667 0.3529 0.6667 1.02e-13 1hxs-a1-m8-c4_1hxs-a1-m9-c4
8 1hxs-a1-m8-c4 68 36 0.6667 0.3529 0.6667 1.02e-13 1hxs-a1-m8-c4_1hxs-a1-m9-c4
9 1v9u-a1-m9-c4 25 19 0.5278 0.7600 1.0000 2.30e-07 1v9u-a1-m8-c4_1v9u-a1-m9-c4
10 1v9u-a1-m8-c4 25 19 0.5278 0.7600 1.0000 2.30e-07 1v9u-a1-m8-c4_1v9u-a1-m9-c4
11 7eai-a1-m9-cB 285 25 0.4167 0.0526 0.6000 7.30e-05 7eai-a1-m8-cB_7eai-a1-m9-cB
12 7eai-a1-m8-cB 285 25 0.4167 0.0526 0.6000 7.30e-05 7eai-a1-m8-cB_7eai-a1-m9-cB
13 1pov-a1-m9-c0 300 19 0.3333 0.0400 0.6316 0.010 1pov-a1-m8-c0_1pov-a1-m9-c0
14 1pov-a1-m8-c0 300 19 0.3333 0.0400 0.6316 0.010 1pov-a1-m8-c0_1pov-a1-m9-c0
15 8ayy-a1-m9-cB 264 32 0.4444 0.0606 0.5000 0.083 8ayy-a1-m58-cB_8ayy-a1-m9-cB
16 8ayy-a1-m58-cB 264 32 0.4444 0.0606 0.5000 0.083 8ayy-a1-m58-cB_8ayy-a1-m9-cB
17 2hma-a1-m2-cA 353 30 0.2778 0.0283 0.3333 8.3 2hma-a1-m1-cA_2hma-a1-m2-cA
18 2hma-a1-m1-cA 353 30 0.2778 0.0283 0.3333 8.3 2hma-a1-m1-cA_2hma-a1-m2-cA
19 7kbp-a2-m1-cC 230 22 0.2500 0.0391 0.4091 9.2 7kbp-a2-m1-cC_7kbp-a2-m2-cD

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Reference:
Jacob Schwartz et al.

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