Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=64)
LPDLCSWEEAQLSSQLYRNKQLQDTLVQKEEELARLHEENNHLRQYLNSALVKCEEEKAK
KELS

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 5c9n-a1-m1-cA 64 64 1.0000 1.0000 1.0000 5.07e-40 5c9n-a1-m1-cB_5c9n-a1-m1-cA
2 5c9n-a1-m1-cB 61 61 0.9531 1.0000 1.0000 2.79e-38 5c9n-a1-m1-cB_5c9n-a1-m1-cA
3 6lfa-a1-m2-cB 62 44 0.2188 0.2258 0.3182 1.4 6lfa-a1-m1-cB_6lfa-a1-m2-cB, 6lfa-a1-m2-cB_6lfa-a1-m2-cA
4 6lfa-a1-m1-cB 62 44 0.2188 0.2258 0.3182 1.4 6lfa-a1-m1-cB_6lfa-a1-m2-cB
5 6lfa-a1-m2-cA 70 44 0.2188 0.2000 0.3182 3.1 6lfa-a1-m1-cA_6lfa-a1-m2-cA, 6lfa-a1-m2-cB_6lfa-a1-m2-cA
6 6lfa-a1-m1-cA 70 44 0.2188 0.2000 0.3182 3.1 6lfa-a1-m1-cA_6lfa-a1-m2-cA
7 4tyb-a1-m1-cB 544 63 0.2812 0.0331 0.2857 3.7 4tyb-a1-m1-cB_4tyb-a1-m1-cA, 4tyb-a1-m1-cB_4tyb-a1-m1-cC
8 4tyb-a1-m1-cC 545 63 0.2812 0.0330 0.2857 3.7 4tyb-a1-m1-cB_4tyb-a1-m1-cC
9 4tyb-a1-m1-cA 545 63 0.2812 0.0330 0.2857 3.7 4tyb-a1-m1-cB_4tyb-a1-m1-cA
10 3q0z-a3-m2-cB 545 55 0.2344 0.0275 0.2727 3.9 3q0z-a3-m2-cB_3q0z-a3-m1-cA
11 3q0z-a3-m1-cA 551 55 0.2344 0.0272 0.2727 4.0 3q0z-a3-m2-cB_3q0z-a3-m1-cA
12 5yz0-a1-m1-cB 2362 28 0.1562 0.0042 0.3571 4.1 5yz0-a1-m1-cA_5yz0-a1-m1-cB
13 5yz0-a1-m1-cA 2362 28 0.1562 0.0042 0.3571 4.1 5yz0-a1-m1-cA_5yz0-a1-m1-cB
14 4dej-a4-m1-cH 201 25 0.1719 0.0547 0.4400 5.5 4dej-a4-m1-cG_4dej-a4-m1-cH
15 4dej-a4-m1-cG 201 25 0.1719 0.0547 0.4400 5.5 4dej-a4-m1-cG_4dej-a4-m1-cH
16 3m9b-a2-m1-cL 186 37 0.2188 0.0753 0.3784 6.2 3m9b-a2-m1-cI_3m9b-a2-m1-cL, 3m9b-a2-m1-cK_3m9b-a2-m1-cL
17 3m9b-a2-m1-cK 186 37 0.2188 0.0753 0.3784 6.2 3m9b-a2-m1-cK_3m9b-a2-m1-cL
18 3m9b-a2-m1-cI 186 37 0.2188 0.0753 0.3784 6.2 3m9b-a2-m1-cI_3m9b-a2-m1-cL
19 3n7t-a2-m2-cA 241 47 0.2031 0.0539 0.2766 6.9 3n7t-a2-m1-cA_3n7t-a2-m2-cA
20 3n7t-a2-m1-cA 241 47 0.2031 0.0539 0.2766 6.9 3n7t-a2-m1-cA_3n7t-a2-m2-cA
21 5hvn-a1-m2-cA 354 46 0.2188 0.0395 0.3043 8.9 5hvn-a1-m1-cA_5hvn-a1-m2-cA
22 5hvn-a1-m1-cA 354 46 0.2188 0.0395 0.3043 8.9 5hvn-a1-m1-cA_5hvn-a1-m2-cA

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600