Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

HomodimerDB
>protein (length=62)
LPFVQLFLEEIGCTQYLDSFIQCNLVTEEEIKYLDKDILIALGVNKIGDRLKILRKSKSF
QR

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 1x9x-a1-m1-cB 62 62 1.0000 1.0000 1.0000 9.74e-40 1x9x-a1-m1-cA_1x9x-a1-m1-cB
2 1x9x-a1-m1-cA 62 62 1.0000 1.0000 1.0000 9.74e-40 1x9x-a1-m1-cA_1x9x-a1-m1-cB
3 8b10-a1-m1-cC 69 59 0.2903 0.2609 0.3051 0.003 8b10-a1-m1-cA_8b10-a1-m1-cC
4 8b10-a1-m1-cA 69 59 0.2903 0.2609 0.3051 0.003 8b10-a1-m1-cA_8b10-a1-m1-cC, 8b10-a1-m1-cF_8b10-a1-m1-cA
5 8b10-a1-m1-cF 67 59 0.2903 0.2687 0.3051 0.003 8b10-a1-m1-cF_8b10-a1-m1-cA
6 1b0x-a1-m2-cA 72 55 0.2258 0.1944 0.2545 0.046 1b0x-a1-m1-cA_1b0x-a1-m2-cA
7 1b0x-a1-m1-cA 72 55 0.2258 0.1944 0.2545 0.046 1b0x-a1-m1-cA_1b0x-a1-m2-cA
8 3bq7-a1-m3-cB 67 59 0.2742 0.2537 0.2881 4.3 3bq7-a1-m3-cB_3bq7-a1-m3-cA
9 3bq7-a1-m3-cA 68 59 0.2742 0.2500 0.2881 4.8 3bq7-a1-m3-cB_3bq7-a1-m3-cA
10 1yxm-a1-m1-cC 264 23 0.1774 0.0417 0.4783 5.0 1yxm-a1-m1-cC_1yxm-a1-m1-cD
11 1yxm-a1-m1-cB 283 23 0.1774 0.0389 0.4783 5.0 1yxm-a1-m1-cB_1yxm-a1-m1-cA, 1yxm-a1-m1-cB_1yxm-a1-m1-cD
12 1yxm-a1-m1-cD 291 23 0.1774 0.0378 0.4783 5.0 1yxm-a1-m1-cB_1yxm-a1-m1-cD, 1yxm-a1-m1-cC_1yxm-a1-m1-cD, 1yxm-a1-m1-cD_1yxm-a1-m1-cA
13 1yxm-a1-m1-cA 297 23 0.1774 0.0370 0.4783 5.0 1yxm-a1-m1-cB_1yxm-a1-m1-cA, 1yxm-a1-m1-cD_1yxm-a1-m1-cA
14 1b4f-a2-m2-cH 76 48 0.2097 0.1711 0.2708 5.4 1b4f-a2-m1-cE_1b4f-a2-m2-cH
15 1b4f-a2-m1-cE 74 50 0.2097 0.1757 0.2600 5.5 1b4f-a2-m1-cE_1b4f-a2-m1-cF, 1b4f-a2-m1-cE_1b4f-a2-m2-cH
16 1b4f-a2-m1-cF 77 48 0.2097 0.1688 0.2708 5.9 1b4f-a2-m1-cE_1b4f-a2-m1-cF
17 4q1t-a1-m1-cD 331 32 0.2581 0.0483 0.5000 6.6 4q1t-a1-m1-cD_4q1t-a1-m1-cA, 4q1t-a1-m1-cD_4q1t-a1-m1-cB, 4q1t-a1-m1-cD_4q1t-a1-m1-cC
18 1zwx-a2-m2-cA 288 43 0.1935 0.0417 0.2791 6.6 1zwx-a2-m1-cA_1zwx-a2-m2-cA
19 1zwx-a2-m1-cA 288 43 0.1935 0.0417 0.2791 6.6 1zwx-a2-m1-cA_1zwx-a2-m2-cA
20 4q1t-a1-m1-cC 351 32 0.2581 0.0456 0.5000 6.6 4q1t-a1-m1-cD_4q1t-a1-m1-cC
21 4q1t-a1-m1-cB 353 32 0.2581 0.0453 0.5000 6.6 4q1t-a1-m1-cD_4q1t-a1-m1-cB

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600