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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=62)
LPFVQLFLEEIGCTQYLDSFIQCNLVTEEEIKYLDKDILIALGVNKIGDRLKILRKSKSF
QR

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 1x9x-a1-m1-cB 62 62 1.0000 1.0000 1.0000 9.74e-40 1x9x-a1-m1-cA_1x9x-a1-m1-cB
2 1x9x-a1-m1-cA 62 62 1.0000 1.0000 1.0000 9.74e-40 1x9x-a1-m1-cA_1x9x-a1-m1-cB
3 8b10-a1-m1-cC 69 59 0.2903 0.2609 0.3051 0.003 8b10-a1-m1-cA_8b10-a1-m1-cC
4 8b10-a1-m1-cA 69 59 0.2903 0.2609 0.3051 0.003 8b10-a1-m1-cA_8b10-a1-m1-cC, 8b10-a1-m1-cF_8b10-a1-m1-cA
5 8b10-a1-m1-cF 67 59 0.2903 0.2687 0.3051 0.003 8b10-a1-m1-cF_8b10-a1-m1-cA
6 1b0x-a1-m2-cA 72 55 0.2258 0.1944 0.2545 0.046 1b0x-a1-m1-cA_1b0x-a1-m2-cA
7 1b0x-a1-m1-cA 72 55 0.2258 0.1944 0.2545 0.046 1b0x-a1-m1-cA_1b0x-a1-m2-cA
8 3bq7-a1-m3-cB 67 59 0.2742 0.2537 0.2881 4.3 3bq7-a1-m3-cB_3bq7-a1-m3-cA
9 3bq7-a1-m3-cA 68 59 0.2742 0.2500 0.2881 4.8 3bq7-a1-m3-cB_3bq7-a1-m3-cA
10 1yxm-a1-m1-cC 264 23 0.1774 0.0417 0.4783 5.0 1yxm-a1-m1-cC_1yxm-a1-m1-cD
11 1yxm-a1-m1-cB 283 23 0.1774 0.0389 0.4783 5.0 1yxm-a1-m1-cB_1yxm-a1-m1-cA, 1yxm-a1-m1-cB_1yxm-a1-m1-cD
12 1yxm-a1-m1-cD 291 23 0.1774 0.0378 0.4783 5.0 1yxm-a1-m1-cB_1yxm-a1-m1-cD, 1yxm-a1-m1-cC_1yxm-a1-m1-cD, 1yxm-a1-m1-cD_1yxm-a1-m1-cA
13 1yxm-a1-m1-cA 297 23 0.1774 0.0370 0.4783 5.0 1yxm-a1-m1-cB_1yxm-a1-m1-cA, 1yxm-a1-m1-cD_1yxm-a1-m1-cA
14 1b4f-a2-m2-cH 76 48 0.2097 0.1711 0.2708 5.4 1b4f-a2-m1-cE_1b4f-a2-m2-cH
15 1b4f-a2-m1-cE 74 50 0.2097 0.1757 0.2600 5.5 1b4f-a2-m1-cE_1b4f-a2-m1-cF, 1b4f-a2-m1-cE_1b4f-a2-m2-cH
16 1b4f-a2-m1-cF 77 48 0.2097 0.1688 0.2708 5.9 1b4f-a2-m1-cE_1b4f-a2-m1-cF
17 4q1t-a1-m1-cD 331 32 0.2581 0.0483 0.5000 6.6 4q1t-a1-m1-cD_4q1t-a1-m1-cA, 4q1t-a1-m1-cD_4q1t-a1-m1-cB, 4q1t-a1-m1-cD_4q1t-a1-m1-cC
18 1zwx-a2-m2-cA 288 43 0.1935 0.0417 0.2791 6.6 1zwx-a2-m1-cA_1zwx-a2-m2-cA
19 1zwx-a2-m1-cA 288 43 0.1935 0.0417 0.2791 6.6 1zwx-a2-m1-cA_1zwx-a2-m2-cA
20 4q1t-a1-m1-cC 351 32 0.2581 0.0456 0.5000 6.6 4q1t-a1-m1-cD_4q1t-a1-m1-cC
21 4q1t-a1-m1-cB 353 32 0.2581 0.0453 0.5000 6.6 4q1t-a1-m1-cD_4q1t-a1-m1-cB

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Reference:
Jacob Schwartz et al.

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