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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=85)
LPHDRMTSQEAACFPDIISGPQQTQKVFLFIRNRTLQLWLDNPKIQLTFEATLQQLEAPY
NSDTVLVHRVHSYLERHGLINFGIY

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 5it3-a1-m2-cA 85 85 1.0000 1.0000 1.0000 8.03e-61 5it3-a1-m1-cA_5it3-a1-m2-cA
2 5it3-a1-m1-cA 85 85 1.0000 1.0000 1.0000 8.03e-61 5it3-a1-m1-cA_5it3-a1-m2-cA
3 4xbf-a1-m4-cA 666 85 1.0000 0.1276 1.0000 4.32e-56 4xbf-a1-m2-cA_4xbf-a1-m4-cA, 4xbf-a1-m3-cA_4xbf-a1-m4-cA
4 4xbf-a1-m3-cA 666 85 1.0000 0.1276 1.0000 4.32e-56 4xbf-a1-m3-cA_4xbf-a1-m4-cA
5 4xbf-a1-m2-cA 666 85 1.0000 0.1276 1.0000 4.32e-56 4xbf-a1-m2-cA_4xbf-a1-m4-cA
6 5gjk-a1-m2-cA 94 77 0.2588 0.2340 0.2857 7.66e-05 5gjk-a1-m1-cA_5gjk-a1-m2-cA
7 5gjk-a1-m1-cA 94 77 0.2588 0.2340 0.2857 7.66e-05 5gjk-a1-m1-cA_5gjk-a1-m2-cA
8 3slr-a2-m2-cA 370 89 0.2824 0.0649 0.2697 0.086 3slr-a2-m1-cA_3slr-a2-m2-cA
9 3slr-a2-m1-cA 370 89 0.2824 0.0649 0.2697 0.086 3slr-a2-m1-cA_3slr-a2-m2-cA
10 7egp-a1-m1-cD 395 83 0.2118 0.0456 0.2169 0.13 7egp-a1-m1-cD_7egp-a1-m1-cE
11 7egp-a1-m1-cE 422 83 0.2118 0.0427 0.2169 0.15 7egp-a1-m1-cD_7egp-a1-m1-cE
12 6kw5-a1-m1-cH 393 62 0.2000 0.0433 0.2742 0.98 6kw5-a1-m1-cD_6kw5-a1-m1-cH
13 4gu1-a3-m1-cB 746 84 0.2941 0.0335 0.2976 1.0 4gu1-a3-m1-cA_4gu1-a3-m1-cB
14 4gu1-a3-m1-cA 746 84 0.2941 0.0335 0.2976 1.0 4gu1-a3-m1-cA_4gu1-a3-m1-cB
15 4fwj-a3-m1-cA 750 84 0.2941 0.0333 0.2976 1.1 4fwj-a3-m1-cB_4fwj-a3-m1-cA
16 4gu0-a2-m1-cD 735 84 0.2941 0.0340 0.2976 1.1 4gu0-a2-m1-cD_4gu0-a2-m1-cB
17 4fwj-a3-m1-cB 742 84 0.2941 0.0337 0.2976 1.1 4fwj-a3-m1-cB_4fwj-a3-m1-cA
18 4gu0-a2-m1-cB 748 84 0.2941 0.0334 0.2976 1.2 4gu0-a2-m1-cD_4gu0-a2-m1-cB
19 6kw5-a1-m1-cD 305 62 0.2000 0.0557 0.2742 1.2 6kw5-a1-m1-cD_6kw5-a1-m1-cH
20 6kyy-a2-m1-cC 441 72 0.2471 0.0476 0.2917 2.6 6kyy-a2-m1-cD_6kyy-a2-m1-cC
21 6kyy-a2-m1-cD 439 72 0.2471 0.0478 0.2917 2.6 6kyy-a2-m1-cD_6kyy-a2-m1-cC
22 4gdi-a1-m1-cB 367 52 0.1765 0.0409 0.2885 4.4 4gdi-a1-m1-cA_4gdi-a1-m1-cB
23 4gdi-a1-m1-cA 367 52 0.1765 0.0409 0.2885 4.4 4gdi-a1-m1-cA_4gdi-a1-m1-cB
24 1tjl-a11-m1-cC 145 48 0.1882 0.1103 0.3333 4.5 1tjl-a11-m1-cA_1tjl-a11-m1-cC
25 1tjl-a11-m1-cA 145 48 0.1882 0.1103 0.3333 4.5 1tjl-a11-m1-cA_1tjl-a11-m1-cC
26 2dq0-a1-m1-cB 447 39 0.1647 0.0313 0.3590 4.6 2dq0-a1-m1-cA_2dq0-a1-m1-cB
27 2dq0-a1-m1-cA 447 39 0.1647 0.0313 0.3590 4.6 2dq0-a1-m1-cA_2dq0-a1-m1-cB

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Reference:
Jacob Schwartz et al.

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