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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=14)
LPSDDLEFWCHVMY

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 5w96-a1-m1-cB 14 14 1.0000 1.0000 1.0000 4.14e-05 5w96-a1-m1-cA_5w96-a1-m1-cB
2 5w96-a1-m1-cA 14 14 1.0000 1.0000 1.0000 4.14e-05 5w96-a1-m1-cA_5w96-a1-m1-cB
3 5wbs-a1-m1-cB 132 13 0.9286 0.0985 1.0000 3.07e-04 5wbs-a1-m1-cB_5wbs-a1-m1-cA
4 5wbs-a1-m1-cA 137 13 0.9286 0.0949 1.0000 3.18e-04 5wbs-a1-m1-cB_5wbs-a1-m1-cA
5 5vbd-a2-m2-cA 85 11 0.5000 0.0824 0.6364 1.4 5vbd-a2-m1-cA_5vbd-a2-m2-cA
6 5vbd-a2-m1-cA 85 11 0.5000 0.0824 0.6364 1.4 5vbd-a2-m1-cA_5vbd-a2-m2-cA
7 5lf5-a1-m2-cA 484 9 0.4286 0.0124 0.6667 6.8 5lf5-a1-m1-cA_5lf5-a1-m2-cA
8 5lf5-a1-m1-cA 484 9 0.4286 0.0124 0.6667 6.8 5lf5-a1-m1-cA_5lf5-a1-m2-cA
9 4b0n-a1-m1-cB 379 10 0.4286 0.0158 0.6000 8.0 4b0n-a1-m1-cA_4b0n-a1-m1-cB
10 4b0n-a1-m1-cA 379 10 0.4286 0.0158 0.6000 8.0 4b0n-a1-m1-cA_4b0n-a1-m1-cB

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Reference:
Jacob Schwartz et al.

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