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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=97)
LPTRRTRTFSATVRASQGPVYKGVCKCFCRSKGHGFITPADGGPDIFLHISDVEGEYVPV
EGDEVTYKMCSIKNEKLQAVEVVITHLAPGTKHETWS

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3aqq-a1-m1-cC 97 97 1.0000 1.0000 1.0000 6.93e-70 3aqq-a1-m1-cC_3aqq-a1-m1-cB, 3aqq-a1-m1-cC_3aqq-a1-m1-cD
2 3aqq-a1-m1-cB 99 99 1.0000 0.9798 0.9798 1.11e-67 3aqq-a1-m1-cC_3aqq-a1-m1-cB, 3aqq-a1-m1-cD_3aqq-a1-m1-cB
3 3aqq-a1-m1-cD 98 98 0.9897 0.9796 0.9796 6.76e-67 3aqq-a1-m1-cC_3aqq-a1-m1-cD, 3aqq-a1-m1-cD_3aqq-a1-m1-cB
4 3i2z-a1-m1-cB 67 52 0.2268 0.3284 0.4231 7.92e-08 3i2z-a1-m1-cB_3i2z-a1-m1-cA
5 3i2z-a1-m1-cA 71 52 0.2268 0.3099 0.4231 9.04e-08 3i2z-a1-m1-cB_3i2z-a1-m1-cA
6 3cam-a1-m1-cB 65 50 0.2165 0.3231 0.4200 3.87e-07 3cam-a1-m1-cA_3cam-a1-m1-cB
7 3cam-a1-m1-cA 65 50 0.2165 0.3231 0.4200 3.87e-07 3cam-a1-m1-cA_3cam-a1-m1-cB
8 5jx4-a1-m1-cB 66 66 0.2474 0.3636 0.3636 5.84e-07 5jx4-a1-m1-cA_5jx4-a1-m1-cB
9 2bh8-a1-m2-cB 86 56 0.2577 0.2907 0.4464 1.74e-06 2bh8-a1-m1-cA_2bh8-a1-m2-cB, 2bh8-a1-m1-cB_2bh8-a1-m2-cB, 2bh8-a1-m2-cA_2bh8-a1-m2-cB
10 2bh8-a1-m1-cB 86 56 0.2577 0.2907 0.4464 1.74e-06 2bh8-a1-m1-cB_2bh8-a1-m2-cB
11 2bh8-a1-m2-cA 85 56 0.2577 0.2941 0.4464 1.75e-06 2bh8-a1-m2-cA_2bh8-a1-m2-cB
12 2bh8-a1-m1-cA 85 56 0.2577 0.2941 0.4464 1.75e-06 2bh8-a1-m1-cA_2bh8-a1-m2-cB
13 5jx4-a1-m1-cA 65 62 0.2371 0.3538 0.3710 1.75e-06 5jx4-a1-m1-cA_5jx4-a1-m1-cB
14 2hax-a1-m1-cB 66 64 0.2474 0.3636 0.3750 3.65e-06 2hax-a1-m1-cA_2hax-a1-m1-cB
15 2hax-a1-m1-cA 66 64 0.2474 0.3636 0.3750 3.65e-06 2hax-a1-m1-cA_2hax-a1-m1-cB
16 1c9o-a1-m1-cB 66 64 0.2474 0.3636 0.3750 3.65e-06 1c9o-a1-m1-cA_1c9o-a1-m1-cB
17 1c9o-a1-m1-cA 66 64 0.2474 0.3636 0.3750 3.65e-06 1c9o-a1-m1-cA_1c9o-a1-m1-cB
18 1hzb-a1-m1-cB 66 64 0.2474 0.3636 0.3750 4.11e-06 1hzb-a1-m1-cA_1hzb-a1-m1-cB
19 1hzb-a1-m1-cA 66 64 0.2474 0.3636 0.3750 4.11e-06 1hzb-a1-m1-cA_1hzb-a1-m1-cB
20 2i5m-a2-m2-cX 66 54 0.1856 0.2727 0.3333 0.004 2i5m-a2-m1-cX_2i5m-a2-m2-cX
21 2i5m-a2-m1-cX 66 54 0.1856 0.2727 0.3333 0.004 2i5m-a2-m1-cX_2i5m-a2-m2-cX
22 6ttb-a1-m1-cA 331 29 0.1237 0.0363 0.4138 0.39 6ttb-a1-m1-cB_6ttb-a1-m1-cA
23 7f3i-a1-m1-cE 91 32 0.1134 0.1209 0.3438 1.1 7f3i-a1-m1-cE_7f3i-a1-m1-cA
24 7f3i-a1-m1-cA 93 27 0.1134 0.1183 0.4074 1.2 7f3i-a1-m1-cE_7f3i-a1-m1-cA
25 5xks-a7-m1-cC 252 94 0.2165 0.0833 0.2234 3.0 5xks-a7-m1-cC_5xks-a7-m1-cF, 5xks-a7-m1-cD_5xks-a7-m1-cC
26 5xks-a7-m1-cA 252 94 0.2165 0.0833 0.2234 3.0 5xks-a7-m1-cA_5xks-a7-m1-cF
27 5xks-a7-m1-cE 251 94 0.2165 0.0837 0.2234 3.0 5xks-a7-m1-cD_5xks-a7-m1-cE
28 5xks-a7-m1-cD 251 94 0.2165 0.0837 0.2234 3.0 5xks-a7-m1-cD_5xks-a7-m1-cC, 5xks-a7-m1-cD_5xks-a7-m1-cE
29 5xks-a7-m1-cF 253 94 0.2165 0.0830 0.2234 3.3 5xks-a7-m1-cA_5xks-a7-m1-cF, 5xks-a7-m1-cC_5xks-a7-m1-cF
30 5a6b-a2-m1-cC 610 52 0.1443 0.0230 0.2692 5.9 5a6b-a2-m1-cC_5a6b-a2-m1-cD
31 5a6b-a2-m1-cD 616 52 0.1443 0.0227 0.2692 5.9 5a6b-a2-m1-cC_5a6b-a2-m1-cD

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Reference:
Jacob Schwartz et al.

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