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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=98)
LPTRRTRTFSATVRASQGPVYKGVCKCFCRSKGHGFITPADGGPDIFLHISDVEGEYVPV
EGDEVTYKMCSIPPNEKLQAVEVVITHLAPGTKHETWS

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3aqq-a1-m1-cD 98 98 1.0000 1.0000 1.0000 1.53e-70 3aqq-a1-m1-cC_3aqq-a1-m1-cD, 3aqq-a1-m1-cD_3aqq-a1-m1-cB
2 3aqq-a1-m1-cB 99 99 1.0000 0.9899 0.9899 1.13e-68 3aqq-a1-m1-cC_3aqq-a1-m1-cB, 3aqq-a1-m1-cD_3aqq-a1-m1-cB
3 3aqq-a1-m1-cC 97 98 0.9796 0.9897 0.9796 6.83e-67 3aqq-a1-m1-cC_3aqq-a1-m1-cB, 3aqq-a1-m1-cC_3aqq-a1-m1-cD
4 3cam-a1-m1-cB 65 63 0.2245 0.3385 0.3492 3.15e-08 3cam-a1-m1-cA_3cam-a1-m1-cB
5 3cam-a1-m1-cA 65 63 0.2245 0.3385 0.3492 3.15e-08 3cam-a1-m1-cA_3cam-a1-m1-cB
6 3i2z-a1-m1-cA 71 52 0.2245 0.3099 0.4231 6.67e-08 3i2z-a1-m1-cB_3i2z-a1-m1-cA
7 3i2z-a1-m1-cB 67 52 0.2245 0.3284 0.4231 7.02e-08 3i2z-a1-m1-cB_3i2z-a1-m1-cA
8 5jx4-a1-m1-cB 66 67 0.2449 0.3636 0.3582 2.89e-07 5jx4-a1-m1-cA_5jx4-a1-m1-cB
9 5jx4-a1-m1-cA 65 63 0.2347 0.3538 0.3651 9.56e-07 5jx4-a1-m1-cA_5jx4-a1-m1-cB
10 1hzb-a1-m1-cB 66 65 0.2449 0.3636 0.3692 1.89e-06 1hzb-a1-m1-cA_1hzb-a1-m1-cB
11 1hzb-a1-m1-cA 66 65 0.2449 0.3636 0.3692 1.89e-06 1hzb-a1-m1-cA_1hzb-a1-m1-cB
12 2hax-a1-m1-cB 66 65 0.2449 0.3636 0.3692 1.95e-06 2hax-a1-m1-cA_2hax-a1-m1-cB
13 2hax-a1-m1-cA 66 65 0.2449 0.3636 0.3692 1.95e-06 2hax-a1-m1-cA_2hax-a1-m1-cB
14 1c9o-a1-m1-cB 66 65 0.2449 0.3636 0.3692 1.95e-06 1c9o-a1-m1-cA_1c9o-a1-m1-cB
15 1c9o-a1-m1-cA 66 65 0.2449 0.3636 0.3692 1.95e-06 1c9o-a1-m1-cA_1c9o-a1-m1-cB
16 2bh8-a1-m2-cB 86 54 0.2551 0.2907 0.4630 2.18e-06 2bh8-a1-m1-cA_2bh8-a1-m2-cB, 2bh8-a1-m1-cB_2bh8-a1-m2-cB, 2bh8-a1-m2-cA_2bh8-a1-m2-cB
17 2bh8-a1-m1-cB 86 54 0.2551 0.2907 0.4630 2.18e-06 2bh8-a1-m1-cB_2bh8-a1-m2-cB
18 2bh8-a1-m2-cA 85 54 0.2551 0.2941 0.4630 2.32e-06 2bh8-a1-m2-cA_2bh8-a1-m2-cB
19 2bh8-a1-m1-cA 85 54 0.2551 0.2941 0.4630 2.32e-06 2bh8-a1-m1-cA_2bh8-a1-m2-cB
20 2i5m-a2-m2-cX 66 54 0.1837 0.2727 0.3333 0.003 2i5m-a2-m1-cX_2i5m-a2-m2-cX
21 2i5m-a2-m1-cX 66 54 0.1837 0.2727 0.3333 0.003 2i5m-a2-m1-cX_2i5m-a2-m2-cX
22 5a6b-a2-m1-cC 610 52 0.1327 0.0213 0.2500 0.30 5a6b-a2-m1-cC_5a6b-a2-m1-cD
23 5a6b-a2-m1-cD 616 52 0.1327 0.0211 0.2500 0.30 5a6b-a2-m1-cC_5a6b-a2-m1-cD
24 6ttb-a1-m1-cA 331 29 0.1224 0.0363 0.4138 0.42 6ttb-a1-m1-cB_6ttb-a1-m1-cA
25 7f3i-a1-m1-cE 91 32 0.1122 0.1209 0.3438 0.77 7f3i-a1-m1-cE_7f3i-a1-m1-cA
26 7f3i-a1-m1-cA 93 32 0.1122 0.1183 0.3438 0.85 7f3i-a1-m1-cE_7f3i-a1-m1-cA

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Reference:
Jacob Schwartz et al.

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