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TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=63)
LQCVCLKTTSGINPRHISSLEVIGAGLHCPSPQLIATLKTGRKICLDQQNPLYKKIIKRL
LKS

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 1plf-a1-m1-cD 65 63 1.0000 0.9692 1.0000 1.41e-40 1plf-a1-m1-cA_1plf-a1-m1-cD, 1plf-a1-m1-cB_1plf-a1-m1-cD, 1plf-a1-m1-cC_1plf-a1-m1-cD
2 1plf-a1-m1-cB 65 63 1.0000 0.9692 1.0000 1.41e-40 1plf-a1-m1-cB_1plf-a1-m1-cD
3 1plf-a1-m1-cC 63 63 1.0000 1.0000 1.0000 1.76e-40 1plf-a1-m1-cA_1plf-a1-m1-cC, 1plf-a1-m1-cC_1plf-a1-m1-cD
4 1plf-a1-m1-cA 63 63 1.0000 1.0000 1.0000 1.76e-40 1plf-a1-m1-cA_1plf-a1-m1-cC, 1plf-a1-m1-cA_1plf-a1-m1-cD
5 4r9w-a1-m2-cB 64 63 0.7619 0.7500 0.7619 2.43e-29 4r9w-a1-m1-cA_4r9w-a1-m2-cB, 4r9w-a1-m2-cA_4r9w-a1-m2-cB
6 4r9y-a1-m1-cD 65 63 0.7619 0.7385 0.7619 3.67e-29 4r9y-a1-m1-cB_4r9y-a1-m1-cD
7 4r9y-a1-m1-cB 65 63 0.7619 0.7385 0.7619 3.67e-29 4r9y-a1-m1-cB_4r9y-a1-m1-cD
8 1f9q-a1-m1-cC 62 62 0.7460 0.7581 0.7581 9.32e-29 1f9q-a1-m1-cB_1f9q-a1-m1-cC
9 1f9q-a1-m1-cB 62 62 0.7460 0.7581 0.7581 9.32e-29 1f9q-a1-m1-cB_1f9q-a1-m1-cC
10 4r9w-a1-m2-cA 62 62 0.7460 0.7581 0.7581 1.17e-28 4r9w-a1-m2-cA_4r9w-a1-m2-cB
11 4r9w-a1-m1-cA 62 62 0.7460 0.7581 0.7581 1.17e-28 4r9w-a1-m1-cA_4r9w-a1-m2-cB
12 1pfn-a1-m1-cD 68 63 0.7460 0.6912 0.7460 2.11e-28 1pfn-a1-m1-cB_1pfn-a1-m1-cD
13 1pfn-a1-m1-cC 68 63 0.7460 0.6912 0.7460 2.11e-28 1pfn-a1-m1-cB_1pfn-a1-m1-cC
14 1pfn-a1-m1-cB 68 63 0.7460 0.6912 0.7460 2.11e-28 1pfn-a1-m1-cB_1pfn-a1-m1-cC, 1pfn-a1-m1-cB_1pfn-a1-m1-cD
15 4hsv-a1-m1-cD 65 63 0.7302 0.7077 0.7302 2.00e-26 4hsv-a1-m1-cA_4hsv-a1-m1-cD, 4hsv-a1-m1-cC_4hsv-a1-m1-cD
16 4hsv-a1-m1-cA 65 63 0.7302 0.7077 0.7302 2.00e-26 4hsv-a1-m1-cA_4hsv-a1-m1-cD
17 4hsv-a1-m1-cC 59 58 0.6825 0.7288 0.7414 4.48e-25 4hsv-a1-m1-cC_4hsv-a1-m1-cD
18 1tvx-a1-m1-cD 71 61 0.5873 0.5211 0.6066 5.57e-21 1tvx-a1-m1-cB_1tvx-a1-m1-cD, 1tvx-a1-m1-cC_1tvx-a1-m1-cD
19 1tvx-a1-m1-cB 71 61 0.5873 0.5211 0.6066 5.57e-21 1tvx-a1-m1-cB_1tvx-a1-m1-cD
20 1tvx-a1-m1-cC 64 61 0.5873 0.5781 0.6066 6.19e-21 1tvx-a1-m1-cA_1tvx-a1-m1-cC, 1tvx-a1-m1-cC_1tvx-a1-m1-cD
21 1tvx-a1-m1-cA 64 61 0.5873 0.5781 0.6066 6.19e-21 1tvx-a1-m1-cA_1tvx-a1-m1-cC
22 2mgs-a1-m1-cB 71 61 0.4444 0.3944 0.4590 7.82e-17 2mgs-a1-m1-cA_2mgs-a1-m1-cB
23 2mgs-a1-m1-cA 71 61 0.4444 0.3944 0.4590 7.82e-17 2mgs-a1-m1-cA_2mgs-a1-m1-cB
24 1msh-a1-m1-cB 72 63 0.4921 0.4306 0.4921 2.54e-16 1msh-a1-m1-cA_1msh-a1-m1-cB
25 1msh-a1-m1-cA 72 63 0.4921 0.4306 0.4921 2.54e-16 1msh-a1-m1-cA_1msh-a1-m1-cB
26 6wzj-a1-m1-cE 63 61 0.4603 0.4603 0.4754 1.11e-14 6wzj-a1-m1-cF_6wzj-a1-m1-cE
27 6wzk-a1-m1-cF 64 61 0.4444 0.4375 0.4590 3.88e-14 6wzk-a1-m1-cE_6wzk-a1-m1-cF
28 6wzk-a1-m1-cE 64 61 0.4444 0.4375 0.4590 3.88e-14 6wzk-a1-m1-cE_6wzk-a1-m1-cF
29 1mi2-a1-m1-cB 73 61 0.4603 0.3973 0.4754 6.28e-14 1mi2-a1-m1-cA_1mi2-a1-m1-cB
30 1mi2-a1-m1-cA 73 61 0.4603 0.3973 0.4754 6.28e-14 1mi2-a1-m1-cA_1mi2-a1-m1-cB
31 3n52-a3-m1-cB 71 61 0.4603 0.4085 0.4754 6.32e-14 3n52-a3-m1-cD_3n52-a3-m1-cB
32 3n52-a3-m1-cD 70 61 0.4603 0.4143 0.4754 7.03e-14 3n52-a3-m1-cC_3n52-a3-m1-cD, 3n52-a3-m1-cD_3n52-a3-m1-cB
33 3n52-a3-m1-cC 67 61 0.4603 0.4328 0.4754 7.29e-14 3n52-a3-m1-cC_3n52-a3-m1-cD
34 1rod-a1-m1-cB 72 64 0.4444 0.3889 0.4375 3.73e-13 1rod-a1-m1-cA_1rod-a1-m1-cB
35 1rod-a1-m1-cA 72 64 0.4444 0.3889 0.4375 3.73e-13 1rod-a1-m1-cA_1rod-a1-m1-cB
36 6wzj-a1-m1-cF 59 61 0.4603 0.4915 0.4754 4.42e-12 6wzj-a1-m1-cF_6wzj-a1-m1-cE
37 1qe6-a3-m2-cA 68 62 0.3333 0.3088 0.3387 3.12e-08 1qe6-a3-m2-cA_1qe6-a3-m2-cB
38 1qe6-a3-m1-cD 72 62 0.3333 0.2917 0.3387 3.15e-08 1qe6-a3-m2-cB_1qe6-a3-m1-cD
39 1qe6-a3-m2-cB 71 62 0.3333 0.2958 0.3387 3.19e-08 1qe6-a3-m2-cA_1qe6-a3-m2-cB, 1qe6-a3-m2-cB_1qe6-a3-m1-cD
40 1o7y-a1-m1-cC 63 65 0.3968 0.3968 0.3846 4.10e-07 1o7y-a1-m1-cB_1o7y-a1-m1-cC, 1o7y-a1-m1-cC_1o7y-a1-m1-cA, 1o7y-a1-m1-cD_1o7y-a1-m1-cC
41 1o7y-a1-m1-cA 67 65 0.3968 0.3731 0.3846 4.47e-07 1o7y-a1-m1-cC_1o7y-a1-m1-cA
42 1o7y-a1-m1-cD 62 64 0.3968 0.4032 0.3906 5.44e-07 1o7y-a1-m1-cD_1o7y-a1-m1-cC
43 1o7y-a1-m1-cB 62 63 0.3968 0.4032 0.3968 7.47e-07 1o7y-a1-m1-cB_1o7y-a1-m1-cC
44 2r3z-a1-m1-cD 64 65 0.3651 0.3594 0.3538 2.00e-04 2r3z-a1-m1-cD_2r3z-a1-m1-cA
45 2r3z-a1-m1-cA 68 65 0.3651 0.3382 0.3538 2.14e-04 2r3z-a1-m1-cB_2r3z-a1-m1-cA, 2r3z-a1-m1-cD_2r3z-a1-m1-cA
46 2r3z-a1-m1-cB 67 65 0.3651 0.3433 0.3538 2.39e-04 2r3z-a1-m1-cB_2r3z-a1-m1-cA
47 4mhe-a2-m1-cC 61 56 0.2857 0.2951 0.3214 0.24 4mhe-a2-m1-cC_4mhe-a2-m1-cB
48 4mhe-a2-m1-cB 69 56 0.2857 0.2609 0.3214 0.30 4mhe-a2-m1-cC_4mhe-a2-m1-cB
49 2fj2-a2-m1-cC 68 32 0.1746 0.1618 0.3438 0.76 2fj2-a2-m1-cD_2fj2-a2-m1-cC
50 2fj2-a2-m1-cD 67 32 0.1746 0.1642 0.3438 0.78 2fj2-a2-m1-cD_2fj2-a2-m1-cC
51 5ltl-a1-m1-cA 67 56 0.2540 0.2388 0.2857 1.0 5ltl-a1-m1-cA_5ltl-a1-m1-cB
52 5ltl-a1-m1-cB 68 56 0.2540 0.2353 0.2857 1.1 5ltl-a1-m1-cA_5ltl-a1-m1-cB
53 5yy3-a1-m4-cA 577 45 0.1429 0.0156 0.2000 3.8 5yy3-a1-m2-cA_5yy3-a1-m4-cA, 5yy3-a1-m3-cA_5yy3-a1-m4-cA
54 5yy3-a1-m3-cA 577 45 0.1429 0.0156 0.2000 3.8 5yy3-a1-m3-cA_5yy3-a1-m4-cA
55 5yy3-a1-m2-cA 577 45 0.1429 0.0156 0.2000 3.8 5yy3-a1-m2-cA_5yy3-a1-m4-cA
56 7qcn-a1-m1-cB 407 27 0.1905 0.0295 0.4444 6.5 7qcn-a1-m1-cA_7qcn-a1-m1-cB
57 7qcn-a1-m1-cA 407 27 0.1905 0.0295 0.4444 6.5 7qcn-a1-m1-cA_7qcn-a1-m1-cB
58 6mhk-a1-m1-cB 534 46 0.2857 0.0337 0.3913 6.9 6mhk-a1-m1-cB_6mhk-a1-m1-cA
59 6mhk-a1-m1-cA 536 46 0.2857 0.0336 0.3913 6.9 6mhk-a1-m1-cB_6mhk-a1-m1-cA
60 7zmc-a1-m1-cA 532 29 0.1905 0.0226 0.4138 7.5 7zmc-a1-m1-cA_7zmc-a1-m1-cB
61 7zmc-a1-m1-cB 539 29 0.1905 0.0223 0.4138 7.5 7zmc-a1-m1-cA_7zmc-a1-m1-cB
62 7zsk-a1-m1-cC 1476 29 0.1905 0.0081 0.4138 7.7 7zsk-a1-m1-cB_7zsk-a1-m1-cC, 7zsk-a1-m1-cC_7zsk-a1-m1-cA, 7zsk-a1-m1-cC_7zsk-a1-m1-cD
63 7zsk-a1-m1-cB 1476 29 0.1905 0.0081 0.4138 7.7 7zsk-a1-m1-cB_7zsk-a1-m1-cA, 7zsk-a1-m1-cB_7zsk-a1-m1-cC
64 7zsk-a1-m1-cD 1482 29 0.1905 0.0081 0.4138 7.7 7zsk-a1-m1-cC_7zsk-a1-m1-cD
65 7zsk-a1-m1-cA 1482 29 0.1905 0.0081 0.4138 7.7 7zsk-a1-m1-cB_7zsk-a1-m1-cA, 7zsk-a1-m1-cC_7zsk-a1-m1-cA
66 6ebn-a1-m1-cB 957 14 0.1111 0.0073 0.5000 9.6 6ebn-a1-m1-cB_6ebn-a1-m1-cA
67 6ebn-a1-m1-cA 960 14 0.1111 0.0073 0.5000 9.6 6ebn-a1-m1-cB_6ebn-a1-m1-cA

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Reference:
Jacob Schwartz et al.

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