Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

HomodimerDB
>protein (length=90)
LQDPAQIVARLEALASPVRLEIFRLLVEQEPTGLVSGDIAEHLGQPHNGISFHLKNLQHA
GLVTVQREGRYQRYRAAMPVVRALVAYLTE

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Dimers
1 6j05-a1-m1-cB 90 90 1.0000 1.0000 1.0000 3.26e-61 6j05-a1-m1-cB_6j05-a1-m1-cA
2 6j05-a1-m1-cA 101 89 0.9889 0.8812 1.0000 1.07e-60 6j05-a1-m1-cB_6j05-a1-m1-cA
3 3f6v-a1-m2-cA 96 69 0.2778 0.2604 0.3623 4.00e-07 3f6v-a1-m1-cA_3f6v-a1-m2-cA
4 3f6v-a1-m1-cA 96 69 0.2778 0.2604 0.3623 4.00e-07 3f6v-a1-m1-cA_3f6v-a1-m2-cA
5 2jsc-a1-m1-cB 97 68 0.3000 0.2784 0.3971 1.06e-05 2jsc-a1-m1-cA_2jsc-a1-m1-cB
6 2jsc-a1-m1-cA 96 68 0.3000 0.2812 0.3971 1.17e-05 2jsc-a1-m1-cA_2jsc-a1-m1-cB
7 4ooi-a1-m1-cA 95 87 0.2778 0.2632 0.2874 1.59e-05 4ooi-a1-m1-cA_4ooi-a1-m1-cB
8 4ooi-a1-m1-cB 96 87 0.2778 0.2604 0.2874 1.64e-05 4ooi-a1-m1-cA_4ooi-a1-m1-cB
9 2lkp-a1-m1-cB 119 73 0.3000 0.2269 0.3699 1.41e-04 2lkp-a1-m1-cA_2lkp-a1-m1-cB
10 2lkp-a1-m1-cA 119 73 0.3000 0.2269 0.3699 1.41e-04 2lkp-a1-m1-cA_2lkp-a1-m1-cB
11 6jmi-a1-m1-cA 100 78 0.2889 0.2600 0.3333 2.05e-04 6jmi-a1-m1-cD_6jmi-a1-m1-cA
12 3cuo-a2-m1-cD 94 83 0.2667 0.2553 0.2892 0.004 3cuo-a2-m1-cD_3cuo-a2-m1-cC
13 3cuo-a2-m1-cC 95 83 0.2667 0.2526 0.2892 0.004 3cuo-a2-m1-cD_3cuo-a2-m1-cC
14 7txn-a1-m1-cB 105 59 0.2333 0.2000 0.3559 0.009 7txn-a1-m1-cA_7txn-a1-m1-cB
15 7txn-a1-m1-cA 104 59 0.2333 0.2019 0.3559 0.011 7txn-a1-m1-cA_7txn-a1-m1-cB
16 2oqg-a1-m1-cD 105 72 0.2556 0.2190 0.3194 0.028 2oqg-a1-m1-cC_2oqg-a1-m1-cD, 2oqg-a1-m1-cD_2oqg-a1-m1-cA, 2oqg-a1-m1-cD_2oqg-a1-m1-cB
17 2oqg-a1-m1-cC 105 72 0.2556 0.2190 0.3194 0.028 2oqg-a1-m1-cC_2oqg-a1-m1-cD
18 2oqg-a1-m1-cA 107 72 0.2556 0.2150 0.3194 0.029 2oqg-a1-m1-cA_2oqg-a1-m1-cB, 2oqg-a1-m1-cD_2oqg-a1-m1-cA
19 2oqg-a1-m1-cB 107 72 0.2556 0.2150 0.3194 0.030 2oqg-a1-m1-cA_2oqg-a1-m1-cB, 2oqg-a1-m1-cD_2oqg-a1-m1-cB
20 3gw2-a1-m2-cA 92 80 0.3444 0.3370 0.3875 0.049 3gw2-a1-m1-cA_3gw2-a1-m2-cA
21 3gw2-a1-m1-cA 92 80 0.3444 0.3370 0.3875 0.049 3gw2-a1-m1-cA_3gw2-a1-m2-cA
22 7p6f-a3-m3-cDDD 97 85 0.3333 0.3093 0.3529 0.056 7p6f-a3-m1-cDDD_7p6f-a3-m3-cDDD
23 7p6f-a3-m1-cDDD 97 85 0.3333 0.3093 0.3529 0.056 7p6f-a3-m1-cDDD_7p6f-a3-m3-cDDD
24 1r23-a1-m1-cB 97 42 0.1444 0.1340 0.3095 0.091 1r23-a1-m1-cB_1r23-a1-m1-cA
25 1r23-a1-m1-cA 104 42 0.1444 0.1250 0.3095 0.100 1r23-a1-m1-cB_1r23-a1-m1-cA
26 3jth-a1-m1-cA 92 83 0.3000 0.2935 0.3253 0.12 3jth-a1-m1-cB_3jth-a1-m1-cA
27 3jth-a1-m1-cB 88 83 0.3000 0.3068 0.3253 0.13 3jth-a1-m1-cB_3jth-a1-m1-cA
28 6j0e-a1-m1-cB 125 65 0.2111 0.1520 0.2923 0.24 6j0e-a1-m1-cA_6j0e-a1-m1-cB
29 6j0e-a1-m1-cA 124 65 0.2111 0.1532 0.2923 0.25 6j0e-a1-m1-cA_6j0e-a1-m1-cB
30 1uly-a1-m2-cA 185 67 0.2444 0.1189 0.3284 0.62 1uly-a1-m1-cA_1uly-a1-m2-cA
31 1uly-a1-m1-cA 185 67 0.2444 0.1189 0.3284 0.62 1uly-a1-m1-cA_1uly-a1-m2-cA
32 7r3g-a1-m1-cB 236 38 0.1667 0.0636 0.3947 0.63 7r3g-a1-m1-cA_7r3g-a1-m1-cB
33 7r3g-a1-m1-cA 236 38 0.1667 0.0636 0.3947 0.63 7r3g-a1-m1-cA_7r3g-a1-m1-cB
34 6srn-a1-m2-cA 187 50 0.1667 0.0802 0.3000 0.76 6srn-a1-m1-cA_6srn-a1-m2-cA
35 6srn-a1-m1-cA 187 50 0.1667 0.0802 0.3000 0.76 6srn-a1-m1-cA_6srn-a1-m2-cA
36 6uvu-a1-m1-cA 111 79 0.2222 0.1802 0.2532 0.92 6uvu-a1-m1-cA_6uvu-a1-m1-cB
37 6uvu-a1-m1-cB 114 79 0.2222 0.1754 0.2532 0.96 6uvu-a1-m1-cA_6uvu-a1-m1-cB
38 4y15-a2-m2-cB 237 53 0.2111 0.0802 0.3585 1.5 4y15-a2-m1-cB_4y15-a2-m2-cB
39 4y15-a2-m1-cB 237 53 0.2111 0.0802 0.3585 1.5 4y15-a2-m1-cB_4y15-a2-m2-cB
40 3f72-a2-m1-cC 103 61 0.2222 0.1942 0.3279 1.6 3f72-a2-m1-cD_3f72-a2-m1-cC
41 3i71-a4-m2-cB 58 40 0.1444 0.2241 0.3250 2.3 3i71-a4-m1-cB_3i71-a4-m2-cB
42 3i71-a4-m1-cB 58 40 0.1444 0.2241 0.3250 2.3 3i71-a4-m1-cB_3i71-a4-m2-cB
43 3i71-a2-m1-cB 58 40 0.1444 0.2241 0.3250 2.3 3i71-a2-m1-cA_3i71-a2-m1-cB
44 3i71-a2-m1-cA 56 40 0.1444 0.2321 0.3250 2.4 3i71-a2-m1-cA_3i71-a2-m1-cB
45 2qvo-a2-m2-cA 87 32 0.1111 0.1149 0.3125 2.7 2qvo-a2-m1-cA_2qvo-a2-m2-cA
46 2qvo-a2-m1-cA 87 32 0.1111 0.1149 0.3125 2.7 2qvo-a2-m1-cA_2qvo-a2-m2-cA
47 3f72-a2-m1-cD 100 62 0.2222 0.2000 0.3226 4.4 3f72-a2-m1-cD_3f72-a2-m1-cC
48 6kyw-a1-m1-cB 386 19 0.1111 0.0259 0.5263 4.4 6kyw-a1-m1-cB_6kyw-a1-m1-cA
49 6kyw-a1-m1-cA 389 19 0.1111 0.0257 0.5263 4.4 6kyw-a1-m1-cB_6kyw-a1-m1-cA
50 2f2e-a3-m3-cA 140 55 0.2111 0.1357 0.3455 5.1 2f2e-a3-m3-cB_2f2e-a3-m3-cA
51 2f2e-a3-m3-cB 138 55 0.2111 0.1377 0.3455 5.2 2f2e-a3-m1-cB_2f2e-a3-m3-cB, 2f2e-a3-m3-cB_2f2e-a3-m3-cA
52 2f2e-a3-m1-cB 138 55 0.2111 0.1377 0.3455 5.2 2f2e-a3-m1-cB_2f2e-a3-m3-cB
53 2f2e-a2-m2-cB 138 55 0.2111 0.1377 0.3455 5.2 2f2e-a2-m1-cB_2f2e-a2-m2-cB
54 2f2e-a2-m1-cB 138 55 0.2111 0.1377 0.3455 5.2 2f2e-a2-m1-cB_2f2e-a2-m2-cB
55 4lxf-a1-m2-cA 570 40 0.1444 0.0228 0.3250 8.5 4lxf-a1-m2-cB_4lxf-a1-m2-cA
56 4lxf-a1-m2-cB 546 40 0.1444 0.0238 0.3250 9.0 4lxf-a1-m1-cB_4lxf-a1-m2-cB, 4lxf-a1-m2-cB_4lxf-a1-m2-cA
57 4lxf-a1-m1-cB 546 40 0.1444 0.0238 0.3250 9.0 4lxf-a1-m1-cB_4lxf-a1-m2-cB

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600