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TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=64)
LRCLCIKTTSGIHPKNIQSLEVIGKGTHCNQVEVIATLKDGRKICLDPDAPRIKKIVQKK
LAGD

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 1tvx-a1-m1-cD 71 64 1.0000 0.9014 1.0000 1.58e-41 1tvx-a1-m1-cB_1tvx-a1-m1-cD, 1tvx-a1-m1-cC_1tvx-a1-m1-cD
2 1tvx-a1-m1-cB 71 64 1.0000 0.9014 1.0000 1.58e-41 1tvx-a1-m1-cB_1tvx-a1-m1-cD
3 1tvx-a1-m1-cC 64 64 1.0000 1.0000 1.0000 2.61e-41 1tvx-a1-m1-cA_1tvx-a1-m1-cC, 1tvx-a1-m1-cC_1tvx-a1-m1-cD
4 1tvx-a1-m1-cA 64 64 1.0000 1.0000 1.0000 2.61e-41 1tvx-a1-m1-cA_1tvx-a1-m1-cC
5 1msh-a1-m1-cB 72 64 0.6094 0.5417 0.6094 9.94e-24 1msh-a1-m1-cA_1msh-a1-m1-cB
6 1msh-a1-m1-cA 72 64 0.6094 0.5417 0.6094 9.94e-24 1msh-a1-m1-cA_1msh-a1-m1-cB
7 2mgs-a1-m1-cB 71 63 0.5469 0.4930 0.5556 5.36e-23 2mgs-a1-m1-cA_2mgs-a1-m1-cB
8 2mgs-a1-m1-cA 71 63 0.5469 0.4930 0.5556 5.36e-23 2mgs-a1-m1-cA_2mgs-a1-m1-cB
9 6wzj-a1-m1-cE 63 61 0.5781 0.5873 0.6066 7.90e-22 6wzj-a1-m1-cF_6wzj-a1-m1-cE
10 1plf-a1-m1-cC 63 61 0.5781 0.5873 0.6066 6.29e-21 1plf-a1-m1-cA_1plf-a1-m1-cC, 1plf-a1-m1-cC_1plf-a1-m1-cD
11 1plf-a1-m1-cA 63 61 0.5781 0.5873 0.6066 6.29e-21 1plf-a1-m1-cA_1plf-a1-m1-cC, 1plf-a1-m1-cA_1plf-a1-m1-cD
12 1plf-a1-m1-cD 65 61 0.5781 0.5692 0.6066 8.33e-21 1plf-a1-m1-cA_1plf-a1-m1-cD, 1plf-a1-m1-cB_1plf-a1-m1-cD, 1plf-a1-m1-cC_1plf-a1-m1-cD
13 1plf-a1-m1-cB 65 61 0.5781 0.5692 0.6066 8.33e-21 1plf-a1-m1-cB_1plf-a1-m1-cD
14 6wzk-a1-m1-cF 64 61 0.5469 0.5469 0.5738 1.12e-20 6wzk-a1-m1-cE_6wzk-a1-m1-cF
15 6wzk-a1-m1-cE 64 61 0.5469 0.5469 0.5738 1.12e-20 6wzk-a1-m1-cE_6wzk-a1-m1-cF
16 4r9w-a1-m2-cA 62 61 0.5781 0.5968 0.6066 1.63e-20 4r9w-a1-m2-cA_4r9w-a1-m2-cB
17 4r9w-a1-m1-cA 62 61 0.5781 0.5968 0.6066 1.63e-20 4r9w-a1-m1-cA_4r9w-a1-m2-cB
18 4r9w-a1-m2-cB 64 63 0.5781 0.5781 0.5873 1.69e-20 4r9w-a1-m1-cA_4r9w-a1-m2-cB, 4r9w-a1-m2-cA_4r9w-a1-m2-cB
19 4r9y-a1-m1-cD 65 61 0.5781 0.5692 0.6066 2.16e-20 4r9y-a1-m1-cB_4r9y-a1-m1-cD
20 4r9y-a1-m1-cB 65 61 0.5781 0.5692 0.6066 2.16e-20 4r9y-a1-m1-cB_4r9y-a1-m1-cD
21 1pfn-a1-m1-cD 68 61 0.5781 0.5441 0.6066 2.63e-20 1pfn-a1-m1-cB_1pfn-a1-m1-cD
22 1pfn-a1-m1-cC 68 61 0.5781 0.5441 0.6066 2.63e-20 1pfn-a1-m1-cB_1pfn-a1-m1-cC
23 1pfn-a1-m1-cB 68 61 0.5781 0.5441 0.6066 2.63e-20 1pfn-a1-m1-cB_1pfn-a1-m1-cC, 1pfn-a1-m1-cB_1pfn-a1-m1-cD
24 3n52-a3-m1-cD 70 61 0.5781 0.5286 0.6066 2.80e-20 3n52-a3-m1-cC_3n52-a3-m1-cD, 3n52-a3-m1-cD_3n52-a3-m1-cB
25 1mi2-a1-m1-cB 73 61 0.5781 0.5068 0.6066 2.93e-20 1mi2-a1-m1-cA_1mi2-a1-m1-cB
26 1mi2-a1-m1-cA 73 61 0.5781 0.5068 0.6066 2.93e-20 1mi2-a1-m1-cA_1mi2-a1-m1-cB
27 3n52-a3-m1-cB 71 61 0.5781 0.5211 0.6066 3.07e-20 3n52-a3-m1-cD_3n52-a3-m1-cB
28 3n52-a3-m1-cC 67 61 0.5781 0.5522 0.6066 3.77e-20 3n52-a3-m1-cC_3n52-a3-m1-cD
29 1f9q-a1-m1-cC 62 60 0.5625 0.5806 0.6000 6.42e-20 1f9q-a1-m1-cB_1f9q-a1-m1-cC
30 1f9q-a1-m1-cB 62 60 0.5625 0.5806 0.6000 6.42e-20 1f9q-a1-m1-cB_1f9q-a1-m1-cC
31 1rod-a1-m1-cB 72 65 0.5469 0.4861 0.5385 1.26e-18 1rod-a1-m1-cA_1rod-a1-m1-cB
32 1rod-a1-m1-cA 72 65 0.5469 0.4861 0.5385 1.26e-18 1rod-a1-m1-cA_1rod-a1-m1-cB
33 4hsv-a1-m1-cD 65 61 0.5469 0.5385 0.5738 1.41e-18 4hsv-a1-m1-cA_4hsv-a1-m1-cD, 4hsv-a1-m1-cC_4hsv-a1-m1-cD
34 4hsv-a1-m1-cA 65 61 0.5469 0.5385 0.5738 1.41e-18 4hsv-a1-m1-cA_4hsv-a1-m1-cD
35 4hsv-a1-m1-cC 59 58 0.5156 0.5593 0.5690 1.42e-17 4hsv-a1-m1-cC_4hsv-a1-m1-cD
36 6wzj-a1-m1-cF 59 61 0.5312 0.5763 0.5574 4.40e-17 6wzj-a1-m1-cF_6wzj-a1-m1-cE
37 1qe6-a3-m2-cB 71 61 0.4531 0.4085 0.4754 3.55e-13 1qe6-a3-m2-cA_1qe6-a3-m2-cB, 1qe6-a3-m2-cB_1qe6-a3-m1-cD
38 1qe6-a3-m1-cD 72 61 0.4531 0.4028 0.4754 3.63e-13 1qe6-a3-m2-cB_1qe6-a3-m1-cD
39 1qe6-a3-m2-cA 68 61 0.4531 0.4265 0.4754 3.64e-13 1qe6-a3-m2-cA_1qe6-a3-m2-cB
40 1o7y-a1-m1-cC 63 60 0.3438 0.3492 0.3667 1.44e-08 1o7y-a1-m1-cB_1o7y-a1-m1-cC, 1o7y-a1-m1-cC_1o7y-a1-m1-cA, 1o7y-a1-m1-cD_1o7y-a1-m1-cC
41 1o7y-a1-m1-cA 67 60 0.3438 0.3284 0.3667 1.49e-08 1o7y-a1-m1-cC_1o7y-a1-m1-cA
42 1o7y-a1-m1-cD 62 59 0.3438 0.3548 0.3729 1.93e-08 1o7y-a1-m1-cD_1o7y-a1-m1-cC
43 1o7y-a1-m1-cB 62 58 0.3281 0.3387 0.3621 1.31e-07 1o7y-a1-m1-cB_1o7y-a1-m1-cC
44 2r3z-a1-m1-cD 64 60 0.3281 0.3281 0.3500 9.16e-05 2r3z-a1-m1-cD_2r3z-a1-m1-cA
45 2r3z-a1-m1-cA 68 60 0.3281 0.3088 0.3500 1.01e-04 2r3z-a1-m1-cB_2r3z-a1-m1-cA, 2r3z-a1-m1-cD_2r3z-a1-m1-cA
46 2r3z-a1-m1-cB 67 60 0.3281 0.3134 0.3500 1.14e-04 2r3z-a1-m1-cB_2r3z-a1-m1-cA
47 3hp3-a3-m1-cD 64 62 0.2656 0.2656 0.2742 0.032 3hp3-a3-m1-cD_3hp3-a3-m1-cF
48 3hp3-a3-m1-cF 65 61 0.2656 0.2615 0.2787 0.035 3hp3-a3-m1-cD_3hp3-a3-m1-cF
49 4uai-a1-m1-cB 67 62 0.2656 0.2537 0.2742 0.040 4uai-a1-m1-cB_4uai-a1-m1-cA
50 4uai-a1-m1-cA 68 62 0.2656 0.2500 0.2742 0.045 4uai-a1-m1-cB_4uai-a1-m1-cA
51 4mhe-a2-m1-cC 61 58 0.2969 0.3115 0.3276 0.79 4mhe-a2-m1-cC_4mhe-a2-m1-cB
52 4mhe-a2-m1-cB 69 58 0.2969 0.2754 0.3276 1.1 4mhe-a2-m1-cC_4mhe-a2-m1-cB
53 7lw1-a1-m1-cF 744 46 0.2344 0.0202 0.3261 1.2 7lw1-a1-m1-cD_7lw1-a1-m1-cF, 7lw1-a1-m1-cE_7lw1-a1-m1-cF
54 7lw1-a1-m1-cE 744 46 0.2344 0.0202 0.3261 1.2 7lw1-a1-m1-cE_7lw1-a1-m1-cF
55 7lw1-a1-m1-cD 744 46 0.2344 0.0202 0.3261 1.2 7lw1-a1-m1-cD_7lw1-a1-m1-cF
56 1nr4-a5-m4-cG 66 30 0.1562 0.1515 0.3333 1.9 1nr4-a5-m4-cG_1nr4-a5-m3-cE
57 1nr4-a5-m3-cE 69 30 0.1562 0.1449 0.3333 1.9 1nr4-a5-m1-cA_1nr4-a5-m3-cE, 1nr4-a5-m3-cF_1nr4-a5-m3-cE, 1nr4-a5-m4-cG_1nr4-a5-m3-cE
58 1nr4-a5-m1-cA 67 30 0.1562 0.1493 0.3333 1.9 1nr4-a5-m1-cA_1nr4-a5-m3-cE
59 1nr4-a5-m3-cF 66 30 0.1562 0.1515 0.3333 2.2 1nr4-a5-m3-cF_1nr4-a5-m3-cE
60 2fj2-a2-m1-cC 68 31 0.1719 0.1618 0.3548 2.4 2fj2-a2-m1-cD_2fj2-a2-m1-cC
61 2fj2-a2-m1-cD 67 31 0.1719 0.1642 0.3548 2.6 2fj2-a2-m1-cD_2fj2-a2-m1-cC
62 1zbs-a1-m2-cA 277 41 0.1719 0.0397 0.2683 6.6 1zbs-a1-m1-cA_1zbs-a1-m2-cA
63 1zbs-a1-m1-cA 277 41 0.1719 0.0397 0.2683 6.6 1zbs-a1-m1-cA_1zbs-a1-m2-cA
64 2jp1-a1-m1-cB 60 24 0.1562 0.1667 0.4167 7.6 2jp1-a1-m1-cA_2jp1-a1-m1-cB
65 2jp1-a1-m1-cA 60 24 0.1562 0.1667 0.4167 7.6 2jp1-a1-m1-cA_2jp1-a1-m1-cB
66 2n54-a1-m1-cB 66 25 0.1562 0.1515 0.4000 7.9 2n54-a1-m1-cA_2n54-a1-m1-cB
67 2n54-a1-m1-cA 66 25 0.1562 0.1515 0.4000 7.9 2n54-a1-m1-cA_2n54-a1-m1-cB
68 5ltl-a1-m1-cA 67 56 0.1875 0.1791 0.2143 7.9 5ltl-a1-m1-cA_5ltl-a1-m1-cB
69 7miw-a1-m1-cB 463 25 0.1406 0.0194 0.3600 8.1 7miw-a1-m1-cB_7miw-a1-m1-cD
70 7miw-a1-m1-cA 463 25 0.1406 0.0194 0.3600 8.1 7miw-a1-m1-cA_7miw-a1-m1-cD
71 7miw-a1-m1-cD 464 25 0.1406 0.0194 0.3600 8.1 7miw-a1-m1-cA_7miw-a1-m1-cD, 7miw-a1-m1-cB_7miw-a1-m1-cD, 7miw-a1-m1-cC_7miw-a1-m1-cD
72 7miw-a1-m1-cC 464 25 0.1406 0.0194 0.3600 8.1 7miw-a1-m1-cC_7miw-a1-m1-cD
73 5ltl-a1-m1-cB 68 56 0.1875 0.1765 0.2143 9.3 5ltl-a1-m1-cA_5ltl-a1-m1-cB

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Reference:
Jacob Schwartz et al.

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