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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=95)
LRIPKNWTIQRSTPFFTKDNVPEALLTHHNTAVDVFGQICVEGVVTYYGFANSEATEPEI
KVVINAGQFATSPPQYWHRIELSDDAQFNINFWSD

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3dl3-a3-m1-cE 108 95 1.0000 0.8796 1.0000 5.97e-69 3dl3-a3-m1-cB_3dl3-a3-m1-cE
2 3dl3-a3-m1-cB 95 95 1.0000 1.0000 1.0000 1.05e-68 3dl3-a3-m1-cB_3dl3-a3-m1-cE
3 3bb6-a3-m1-cD 100 96 0.4211 0.4000 0.4167 4.65e-23 3bb6-a3-m1-cD_3bb6-a3-m1-cB
4 3bb6-a1-m1-cD 100 96 0.4211 0.4000 0.4167 4.65e-23 3bb6-a1-m1-cD_3bb6-a1-m1-cA
5 3bb6-a1-m1-cA 105 96 0.4211 0.3810 0.4167 4.94e-23 3bb6-a1-m1-cD_3bb6-a1-m1-cA
6 3bb6-a3-m1-cB 107 96 0.4211 0.3738 0.4167 5.10e-23 3bb6-a3-m1-cD_3bb6-a3-m1-cB
7 7cyx-a1-m1-cA 363 39 0.1579 0.0413 0.3846 8.7 7cyx-a1-m1-cB_7cyx-a1-m1-cA

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Reference:
Jacob Schwartz et al.

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