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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=72)
LRLGERVLVVGQRLGTIRFFGTTNFAPGYWYGIELEKPHGKNDGSVGGVQYFSCSPRYGI
FAPPSRVQRVTD

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2z0w-a1-m2-cA 72 72 1.0000 1.0000 1.0000 5.10e-49 2z0w-a1-m1-cA_2z0w-a1-m2-cA
2 2z0w-a1-m1-cA 72 72 1.0000 1.0000 1.0000 5.10e-49 2z0w-a1-m1-cA_2z0w-a1-m2-cA
3 2hkn-a1-m1-cA 76 69 0.4444 0.4211 0.4638 1.84e-16 2hkn-a1-m1-cB_2hkn-a1-m1-cA
4 3e2u-a5-m1-cC 72 69 0.4444 0.4444 0.4638 1.98e-16 3e2u-a5-m1-cB_3e2u-a5-m1-cC
5 3e2u-a5-m1-cB 72 69 0.4444 0.4444 0.4638 1.98e-16 3e2u-a5-m1-cB_3e2u-a5-m1-cC
6 2hkn-a1-m1-cB 72 69 0.4444 0.4444 0.4638 1.98e-16 2hkn-a1-m1-cB_2hkn-a1-m1-cA
7 1txq-a1-m2-cA 74 69 0.4444 0.4324 0.4638 2.20e-16 1txq-a1-m1-cA_1txq-a1-m2-cA
8 1txq-a1-m1-cA 74 69 0.4444 0.4324 0.4638 2.20e-16 1txq-a1-m1-cA_1txq-a1-m2-cA
9 7pa8-a1-m1-cFFF 191 40 0.1667 0.0628 0.3000 0.50 7pa8-a1-m1-cMMM_7pa8-a1-m1-cFFF
10 7fcl-a2-m2-cC 146 33 0.1667 0.0822 0.3636 2.6 7fcl-a2-m1-cC_7fcl-a2-m2-cC
11 7fcl-a2-m1-cC 146 33 0.1667 0.0822 0.3636 2.6 7fcl-a2-m1-cC_7fcl-a2-m2-cC
12 1otk-a1-m1-cB 244 15 0.1389 0.0410 0.6667 9.9 1otk-a1-m1-cA_1otk-a1-m1-cB
13 1otk-a1-m1-cA 244 15 0.1389 0.0410 0.6667 9.9 1otk-a1-m1-cA_1otk-a1-m1-cB
14 3pvt-a1-m2-cC 248 15 0.1389 0.0403 0.6667 9.9 3pvt-a1-m1-cC_3pvt-a1-m2-cC
15 3pvt-a1-m1-cC 248 15 0.1389 0.0403 0.6667 9.9 3pvt-a1-m1-cC_3pvt-a1-m2-cC

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Reference:
Jacob Schwartz et al.

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