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TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=32)
LSEEEIQRIFGLSSEQIKSLPEEYKKVETGYL

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 7arr-a1-m1-cA 32 32 1.0000 1.0000 1.0000 5.34e-16 7arr-a1-m1-cD_7arr-a1-m1-cA
2 7arr-a1-m1-cD 30 30 0.9375 1.0000 1.0000 2.23e-14 7arr-a1-m1-cD_7arr-a1-m1-cA
3 4e37-a1-m1-cC 478 30 0.2812 0.0188 0.3000 0.31 4e37-a1-m1-cC_4e37-a1-m1-cD
4 4e37-a1-m1-cD 479 30 0.2812 0.0188 0.3000 0.33 4e37-a1-m1-cA_4e37-a1-m1-cD, 4e37-a1-m1-cB_4e37-a1-m1-cD, 4e37-a1-m1-cC_4e37-a1-m1-cD
5 4e37-a1-m1-cB 479 30 0.2812 0.0188 0.3000 0.33 4e37-a1-m1-cB_4e37-a1-m1-cD
6 4e37-a1-m1-cA 478 30 0.2812 0.0188 0.3000 0.33 4e37-a1-m1-cA_4e37-a1-m1-cD
7 5i1n-a1-m1-cD 34 21 0.2188 0.2059 0.3333 1.9 5i1n-a1-m1-cB_5i1n-a1-m1-cD
8 5i1n-a1-m1-cB 34 21 0.2188 0.2059 0.3333 1.9 5i1n-a1-m1-cB_5i1n-a1-m1-cD
9 5i1s-a1-m1-cB 34 21 0.2188 0.2059 0.3333 2.2 5i1s-a1-m1-cA_5i1s-a1-m1-cB
10 5i1s-a1-m1-cA 34 21 0.2188 0.2059 0.3333 2.2 5i1s-a1-m1-cA_5i1s-a1-m1-cB
11 3g1u-a1-m1-cC 424 29 0.3125 0.0236 0.3448 2.9 3g1u-a1-m1-cD_3g1u-a1-m1-cC
12 3g1u-a1-m1-cD 418 29 0.3125 0.0239 0.3448 2.9 3g1u-a1-m1-cA_3g1u-a1-m1-cD, 3g1u-a1-m1-cB_3g1u-a1-m1-cD, 3g1u-a1-m1-cD_3g1u-a1-m1-cC
13 3g1u-a1-m1-cB 412 29 0.3125 0.0243 0.3448 2.9 3g1u-a1-m1-cB_3g1u-a1-m1-cD
14 3g1u-a1-m1-cA 412 29 0.3125 0.0243 0.3448 2.9 3g1u-a1-m1-cA_3g1u-a1-m1-cD
15 5eox-a1-m1-cA 351 26 0.3750 0.0342 0.4615 4.7 5eox-a1-m1-cA_5eox-a1-m1-cB
16 6ynz-a1-m1-cb3 354 32 0.3438 0.0311 0.3438 5.4 6ynz-a1-m1-cB3_6ynz-a1-m1-cb3
17 6ynz-a1-m1-cB3 354 32 0.3438 0.0311 0.3438 5.4 6ynz-a1-m1-cB3_6ynz-a1-m1-cb3
18 4w8f-a3-m1-cB 2609 25 0.3125 0.0038 0.4000 6.2 4w8f-a3-m1-cA_4w8f-a3-m1-cB
19 4akg-a1-m1-cB 2650 25 0.3125 0.0038 0.4000 6.2 4akg-a1-m1-cA_4akg-a1-m1-cB
20 4akg-a1-m1-cA 2650 25 0.3125 0.0038 0.4000 6.2 4akg-a1-m1-cA_4akg-a1-m1-cB
21 4w8f-a3-m1-cA 2608 25 0.3125 0.0038 0.4000 6.2 4w8f-a3-m1-cA_4w8f-a3-m1-cB
22 2iz1-a1-m1-cB 471 27 0.3125 0.0212 0.3704 7.5 2iz1-a1-m1-cA_2iz1-a1-m1-cB
23 2iz1-a1-m1-cA 469 27 0.3125 0.0213 0.3704 7.6 2iz1-a1-m1-cA_2iz1-a1-m1-cB
24 6u4b-a1-m3-cA 570 20 0.2812 0.0158 0.4500 8.6 6u4b-a1-m2-cA_6u4b-a1-m3-cA
25 6u4b-a1-m2-cA 570 20 0.2812 0.0158 0.4500 8.6 6u4b-a1-m2-cA_6u4b-a1-m3-cA
26 2c4m-a2-m1-cD 788 25 0.3438 0.0140 0.4400 9.0 2c4m-a2-m1-cD_2c4m-a2-m1-cC
27 2c4m-a2-m1-cC 790 25 0.3438 0.0139 0.4400 9.0 2c4m-a2-m1-cD_2c4m-a2-m1-cC
28 2rdz-a2-m1-cD 441 25 0.2812 0.0204 0.3600 9.6 2rdz-a2-m1-cC_2rdz-a2-m1-cD
29 2rdz-a2-m1-cC 441 25 0.2812 0.0204 0.3600 9.6 2rdz-a2-m1-cC_2rdz-a2-m1-cD

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Reference:
Jacob Schwartz et al.

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