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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=94)
LSGTWYVLEGDPGEHLVVEALGERLSGIWTSRELAEAFLAHHPHLGRVSALESRALKEAY
LRALGLQVEAVVDYRPGTHRAQVARVKDLLEEVR

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2z0r-a7-m1-cF 96 94 1.0000 0.9792 1.0000 1.29e-62 2z0r-a7-m1-cA_2z0r-a7-m1-cF
2 2z0r-a7-m1-cA 94 94 1.0000 1.0000 1.0000 1.63e-62 2z0r-a7-m1-cA_2z0r-a7-m1-cB, 2z0r-a7-m1-cA_2z0r-a7-m1-cF
3 2z0r-a7-m1-cB 97 94 1.0000 0.9691 1.0000 1.76e-62 2z0r-a7-m1-cA_2z0r-a7-m1-cB
4 3sn1-a1-m8-cA 391 56 0.2234 0.0537 0.3750 0.75 3sn1-a1-m2-cA_3sn1-a1-m8-cA, 3sn1-a1-m4-cA_3sn1-a1-m8-cA, 3sn1-a1-m6-cA_3sn1-a1-m8-cA
5 3sn1-a1-m6-cA 391 56 0.2234 0.0537 0.3750 0.75 3sn1-a1-m6-cA_3sn1-a1-m8-cA
6 3sn1-a1-m4-cA 391 56 0.2234 0.0537 0.3750 0.75 3sn1-a1-m4-cA_3sn1-a1-m8-cA
7 3sn1-a1-m2-cA 391 56 0.2234 0.0537 0.3750 0.75 3sn1-a1-m2-cA_3sn1-a1-m8-cA
8 5iz2-a1-m1-cB 126 62 0.1596 0.1190 0.2419 0.93 5iz2-a1-m1-cA_5iz2-a1-m1-cB
9 5iz2-a1-m1-cA 119 62 0.1596 0.1261 0.2419 0.95 5iz2-a1-m1-cA_5iz2-a1-m1-cB
10 6tc0-a3-m1-cE 154 89 0.2660 0.1623 0.2809 1.9 6tc0-a3-m1-cB_6tc0-a3-m1-cE
11 6tc0-a3-m1-cB 154 89 0.2660 0.1623 0.2809 1.9 6tc0-a3-m1-cB_6tc0-a3-m1-cE

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Reference:
Jacob Schwartz et al.

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