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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=94)
LSLPWFHGKISGQEAVQQLQPPEDGLFLVRESARHPGDYVLCVSFGRDVIHYRVLHRDGH
LTIDEAVFFCNLDVEHYSKDKGAICTKLVRPKRK

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3us4-a2-m2-cA 94 94 1.0000 1.0000 1.0000 3.39e-67 3us4-a2-m1-cA_3us4-a2-m2-cA
2 3us4-a2-m1-cA 94 94 1.0000 1.0000 1.0000 3.39e-67 3us4-a2-m1-cA_3us4-a2-m2-cA
3 1k9a-a7-m1-cC 438 92 0.5319 0.1142 0.5435 1.07e-30 1k9a-a7-m2-cD_1k9a-a7-m1-cC
4 1k9a-a7-m2-cD 433 92 0.4894 0.1062 0.5000 1.50e-24 1k9a-a7-m2-cD_1k9a-a7-m1-cC
5 2aug-a2-m3-cB 108 96 0.3936 0.3426 0.3854 6.68e-10 2aug-a2-m1-cB_2aug-a2-m3-cB
6 2aug-a2-m1-cB 108 96 0.3936 0.3426 0.3854 6.68e-10 2aug-a2-m1-cB_2aug-a2-m3-cB
7 1bhh-a1-m1-cB 103 98 0.3617 0.3301 0.3469 2.19e-09 1bhh-a1-m1-cB_1bhh-a1-m1-cA
8 1bhh-a1-m1-cA 104 98 0.3617 0.3269 0.3469 2.41e-09 1bhh-a1-m1-cB_1bhh-a1-m1-cA
9 1a81-a1-m1-cK 220 97 0.3830 0.1636 0.3711 5.74e-09 1a81-a1-m1-cG_1a81-a1-m1-cK, 1a81-a1-m1-cK_1a81-a1-m1-cI
10 1a81-a1-m1-cK 220 54 0.2234 0.0955 0.3889 8.26e-05 1a81-a1-m1-cG_1a81-a1-m1-cK, 1a81-a1-m1-cK_1a81-a1-m1-cI
11 1a81-a1-m1-cG 220 97 0.3830 0.1636 0.3711 5.74e-09 1a81-a1-m1-cG_1a81-a1-m1-cK
12 1a81-a1-m1-cG 220 54 0.2234 0.0955 0.3889 8.26e-05 1a81-a1-m1-cG_1a81-a1-m1-cK
13 1x27-a1-m1-cF 163 98 0.3617 0.2086 0.3469 6.41e-09 1x27-a1-m1-cA_1x27-a1-m1-cF, 1x27-a1-m1-cD_1x27-a1-m1-cF
14 1x27-a1-m1-cD 163 98 0.3617 0.2086 0.3469 6.41e-09 1x27-a1-m1-cD_1x27-a1-m1-cF
15 1x27-a1-m1-cA 163 98 0.3617 0.2086 0.3469 6.41e-09 1x27-a1-m1-cA_1x27-a1-m1-cF
16 1a81-a1-m1-cI 254 97 0.3830 0.1417 0.3711 6.41e-09 1a81-a1-m1-cK_1a81-a1-m1-cI
17 1a81-a1-m1-cI 254 54 0.2234 0.0827 0.3889 1.04e-04 1a81-a1-m1-cK_1a81-a1-m1-cI
18 1bkl-a1-m2-cA 110 95 0.3723 0.3182 0.3684 2.64e-08 1bkl-a1-m1-cA_1bkl-a1-m2-cA
19 1bkl-a1-m1-cA 110 95 0.3723 0.3182 0.3684 2.64e-08 1bkl-a1-m1-cA_1bkl-a1-m2-cA
20 1f1w-a3-m3-cA 104 99 0.3723 0.3365 0.3535 4.42e-08 1f1w-a3-m1-cA_1f1w-a3-m3-cA
21 1f1w-a3-m1-cA 104 99 0.3723 0.3365 0.3535 4.42e-08 1f1w-a3-m1-cA_1f1w-a3-m3-cA
22 1f1w-a2-m2-cA 104 99 0.3723 0.3365 0.3535 4.42e-08 1f1w-a2-m1-cA_1f1w-a2-m2-cA
23 1f1w-a2-m1-cA 104 99 0.3723 0.3365 0.3535 4.42e-08 1f1w-a2-m1-cA_1f1w-a2-m2-cA
24 4wwq-a1-m1-cA 112 53 0.2660 0.2232 0.4717 5.74e-08 4wwq-a1-m1-cA_4wwq-a1-m1-cB
25 2qms-a2-m2-cD 113 53 0.2660 0.2212 0.4717 6.37e-08 2qms-a2-m1-cB_2qms-a2-m2-cD
26 2qms-a2-m1-cB 113 53 0.2660 0.2212 0.4717 6.37e-08 2qms-a2-m1-cB_2qms-a2-m2-cD
27 4wwq-a1-m1-cB 119 53 0.2660 0.2101 0.4717 7.91e-08 4wwq-a1-m1-cA_4wwq-a1-m1-cB
28 1cwe-a1-m1-cC 98 96 0.3404 0.3265 0.3333 2.88e-07 1cwe-a1-m1-cA_1cwe-a1-m1-cC
29 1cwe-a1-m1-cA 98 96 0.3404 0.3265 0.3333 2.88e-07 1cwe-a1-m1-cA_1cwe-a1-m1-cC
30 1a1b-a1-m1-cB 104 95 0.3617 0.3269 0.3579 3.49e-07 1a1b-a1-m1-cB_1a1b-a1-m1-cA
31 1a1b-a1-m1-cA 105 95 0.3617 0.3238 0.3579 3.55e-07 1a1b-a1-m1-cB_1a1b-a1-m1-cA
32 1opl-a3-m2-cA 451 93 0.3298 0.0687 0.3333 8.06e-07 1opl-a3-m1-cA_1opl-a3-m2-cA
33 1opl-a3-m1-cA 451 93 0.3298 0.0687 0.3333 8.06e-07 1opl-a3-m1-cA_1opl-a3-m2-cA
34 1rpy-a2-m2-cB 85 77 0.2660 0.2941 0.3247 1.34e-06 1rpy-a2-m1-cB_1rpy-a2-m2-cB
35 1rpy-a2-m1-cB 85 77 0.2660 0.2941 0.3247 1.34e-06 1rpy-a2-m1-cB_1rpy-a2-m2-cB
36 3ps5-a2-m2-cA 529 87 0.3404 0.0605 0.3678 1.79e-06 3ps5-a2-m1-cA_3ps5-a2-m2-cA
37 3ps5-a2-m2-cA 529 83 0.2766 0.0491 0.3133 1.59e-04 3ps5-a2-m1-cA_3ps5-a2-m2-cA
38 3ps5-a2-m1-cA 529 87 0.3404 0.0605 0.3678 1.79e-06 3ps5-a2-m1-cA_3ps5-a2-m2-cA
39 3ps5-a2-m1-cA 529 83 0.2766 0.0491 0.3133 1.59e-04 3ps5-a2-m1-cA_3ps5-a2-m2-cA
40 4u17-a2-m2-cB 102 99 0.3404 0.3137 0.3232 2.50e-06 4u17-a2-m1-cB_4u17-a2-m2-cB
41 4u17-a2-m1-cB 102 99 0.3404 0.3137 0.3232 2.50e-06 4u17-a2-m1-cB_4u17-a2-m2-cB
42 4u5w-a1-m1-cB 163 97 0.3511 0.2025 0.3402 3.04e-06 4u5w-a1-m1-cD_4u5w-a1-m1-cB
43 1rqq-a1-m1-cD 83 54 0.2234 0.2530 0.3889 5.16e-06 1rqq-a1-m1-cC_1rqq-a1-m1-cD
44 1rqq-a1-m1-cC 83 54 0.2234 0.2530 0.3889 5.16e-06 1rqq-a1-m1-cC_1rqq-a1-m1-cD
45 2hck-a1-m1-cB 437 97 0.3511 0.0755 0.3402 5.77e-06 2hck-a1-m1-cA_2hck-a1-m1-cB
46 2hck-a1-m1-cA 437 97 0.3511 0.0755 0.3402 5.77e-06 2hck-a1-m1-cA_2hck-a1-m1-cB
47 1r1s-a5-m1-cA 96 51 0.1915 0.1875 0.3529 6.71e-06 1r1s-a5-m1-cA_1r1s-a5-m1-cE
48 1r1s-a5-m1-cE 99 51 0.1915 0.1818 0.3529 6.94e-06 1r1s-a5-m1-cA_1r1s-a5-m1-cE
49 1nrv-a1-m1-cB 100 88 0.2979 0.2800 0.3182 8.74e-06 1nrv-a1-m1-cA_1nrv-a1-m1-cB
50 1nrv-a1-m1-cA 100 88 0.2979 0.2800 0.3182 8.74e-06 1nrv-a1-m1-cA_1nrv-a1-m1-cB
51 7mp3-a1-m1-cA 102 53 0.2553 0.2353 0.4528 4.50e-05 7mp3-a1-m1-cB_7mp3-a1-m1-cA
52 7mp3-a1-m1-cB 97 53 0.2553 0.2474 0.4528 5.33e-05 7mp3-a1-m1-cB_7mp3-a1-m1-cA
53 2ci8-a1-m2-cA 98 78 0.2340 0.2245 0.2821 2.68e-04 2ci8-a1-m1-cA_2ci8-a1-m2-cA
54 2ci8-a1-m1-cA 98 78 0.2340 0.2245 0.2821 2.68e-04 2ci8-a1-m1-cA_2ci8-a1-m2-cA
55 4u5w-a1-m1-cD 160 97 0.3404 0.2000 0.3299 7.83e-04 4u5w-a1-m1-cD_4u5w-a1-m1-cB
56 1d1z-a2-m2-cA 101 50 0.2128 0.1980 0.4000 0.003 1d1z-a2-m1-cD_1d1z-a2-m2-cA
57 1d1z-a2-m1-cD 101 50 0.2128 0.1980 0.4000 0.003 1d1z-a2-m1-cB_1d1z-a2-m1-cD, 1d1z-a2-m1-cD_1d1z-a2-m2-cA
58 1d1z-a1-m1-cD 101 50 0.2128 0.1980 0.4000 0.003 1d1z-a1-m1-cC_1d1z-a1-m1-cD
59 1d1z-a1-m1-cC 101 50 0.2128 0.1980 0.4000 0.003 1d1z-a1-m1-cC_1d1z-a1-m1-cD
60 1d1z-a2-m1-cB 94 50 0.2128 0.2128 0.4000 0.003 1d1z-a2-m1-cB_1d1z-a2-m1-cD
61 1uur-a1-m2-cA 460 65 0.2234 0.0457 0.3231 0.42 1uur-a1-m1-cA_1uur-a1-m2-cA
62 1uur-a1-m1-cA 460 65 0.2234 0.0457 0.3231 0.42 1uur-a1-m1-cA_1uur-a1-m2-cA
63 3h9w-a1-m2-cA 106 76 0.2766 0.2453 0.3421 0.57 3h9w-a1-m1-cA_3h9w-a1-m2-cA
64 3h9w-a1-m1-cA 106 76 0.2766 0.2453 0.3421 0.57 3h9w-a1-m1-cA_3h9w-a1-m2-cA
65 6qpx-a1-m4-cA 454 36 0.1489 0.0308 0.3889 1.3 6qpx-a1-m2-cA_6qpx-a1-m4-cA
66 6qpx-a1-m2-cA 454 36 0.1489 0.0308 0.3889 1.3 6qpx-a1-m2-cA_6qpx-a1-m4-cA
67 7ouu-a1-m1-cB 204 33 0.1277 0.0588 0.3636 3.1 7ouu-a1-m1-cA_7ouu-a1-m1-cB
68 7ouu-a1-m1-cA 202 33 0.1277 0.0594 0.3636 3.2 7ouu-a1-m1-cA_7ouu-a1-m1-cB
69 4f32-a1-m1-cA 419 51 0.1809 0.0406 0.3333 3.2 4f32-a1-m1-cA_4f32-a1-m1-cB
70 4f32-a1-m1-cB 422 51 0.1809 0.0403 0.3333 3.2 4f32-a1-m1-cA_4f32-a1-m1-cB
71 7ouv-a1-m1-cA 204 33 0.1277 0.0588 0.3636 3.2 7ouv-a1-m1-cB_7ouv-a1-m1-cA
72 7ouv-a1-m1-cB 202 33 0.1277 0.0594 0.3636 3.2 7ouv-a1-m1-cB_7ouv-a1-m1-cA
73 1c7n-a4-m1-cH 394 70 0.2340 0.0558 0.3143 7.6 1c7n-a4-m1-cG_1c7n-a4-m1-cH
74 1c7n-a4-m1-cG 394 70 0.2340 0.0558 0.3143 7.6 1c7n-a4-m1-cG_1c7n-a4-m1-cH

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Reference:
Jacob Schwartz et al.

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