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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=73)
LSLTGLKRAMLSLIDGRGPTRFVLALLAFFRFTAIAPTRAVLDRWRSVNKQTAMKHLLSF
KKELGTLTSAINR

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 1sfk-a4-m6-cG 73 73 1.0000 1.0000 1.0000 1.84e-47 1sfk-a4-m3-cG_1sfk-a4-m6-cG, 1sfk-a4-m6-cH_1sfk-a4-m6-cG
2 1sfk-a4-m5-cE 73 73 1.0000 1.0000 1.0000 1.84e-47 1sfk-a4-m6-cH_1sfk-a4-m5-cE
3 1sfk-a4-m3-cG 73 73 1.0000 1.0000 1.0000 1.84e-47 1sfk-a4-m3-cG_1sfk-a4-m6-cG
4 1sfk-a3-m4-cC 73 73 1.0000 1.0000 1.0000 1.84e-47 1sfk-a3-m2-cA_1sfk-a3-m4-cC
5 1sfk-a3-m2-cA 73 73 1.0000 1.0000 1.0000 1.84e-47 1sfk-a3-m2-cA_1sfk-a3-m4-cC
6 1sfk-a1-m1-cD 73 73 1.0000 1.0000 1.0000 1.84e-47 1sfk-a1-m1-cA_1sfk-a1-m1-cD
7 1sfk-a1-m1-cA 73 73 1.0000 1.0000 1.0000 1.84e-47 1sfk-a1-m1-cA_1sfk-a1-m1-cD
8 1sfk-a4-m6-cH 58 58 0.7945 1.0000 1.0000 4.87e-37 1sfk-a4-m6-cH_1sfk-a4-m5-cE, 1sfk-a4-m6-cH_1sfk-a4-m6-cG
9 5ow2-a1-m1-cB 73 71 0.6301 0.6301 0.6479 2.12e-31 5ow2-a1-m1-cA_5ow2-a1-m1-cB
10 5ow2-a1-m1-cA 73 71 0.6301 0.6301 0.6479 2.12e-31 5ow2-a1-m1-cA_5ow2-a1-m1-cB
11 6vg5-a1-m2-cB 81 67 0.3836 0.3457 0.4179 1.02e-14 6vg5-a1-m1-cB_6vg5-a1-m2-cB, 6vg5-a1-m2-cA_6vg5-a1-m2-cB
12 6vg5-a1-m2-cA 81 67 0.3836 0.3457 0.4179 1.02e-14 6vg5-a1-m2-cA_6vg5-a1-m2-cB
13 6vg5-a1-m1-cB 81 67 0.3836 0.3457 0.4179 1.02e-14 6vg5-a1-m1-cB_6vg5-a1-m2-cB
14 1r6r-a1-m1-cB 80 67 0.3836 0.3500 0.4179 1.04e-14 1r6r-a1-m1-cA_1r6r-a1-m1-cB
15 1r6r-a1-m1-cA 80 67 0.3836 0.3500 0.4179 1.04e-14 1r6r-a1-m1-cA_1r6r-a1-m1-cB
16 3ggp-a2-m1-cB 284 49 0.2329 0.0599 0.3469 0.97 3ggp-a2-m1-cB_3ggp-a2-m1-cD
17 3ggp-a2-m1-cD 286 49 0.2329 0.0594 0.3469 0.97 3ggp-a2-m1-cB_3ggp-a2-m1-cD
18 6a51-a3-m1-cA 157 56 0.2466 0.1146 0.3214 6.3 6a51-a3-m1-cA_6a51-a3-m1-cB
19 6a51-a3-m1-cB 158 56 0.2466 0.1139 0.3214 6.7 6a51-a3-m1-cA_6a51-a3-m1-cB

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Reference:
Jacob Schwartz et al.

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