Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

HomodimerDB
>protein (length=88)
LSNEVSTDEALLKRYRKEIDLKKQLEEVSLETRAQAEKDQLEKERDFYFGKLRNIELICQ
ENEGENDPVLQRIVDILYATDEGFVIPD

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Dimers
1 5jvp-a2-m3-cB 88 88 1.0000 1.0000 1.0000 4.71e-59 5jvp-a2-m1-cB_5jvp-a2-m3-cB
2 5jvp-a2-m1-cB 88 88 1.0000 1.0000 1.0000 4.71e-59 5jvp-a2-m1-cB_5jvp-a2-m3-cB
3 5jvm-a1-m1-cA 82 89 0.7045 0.7561 0.6966 1.04e-32 5jvm-a1-m1-cB_5jvm-a1-m1-cA
4 5jvu-a1-m1-cA 76 57 0.5568 0.6447 0.8596 4.97e-31 5jvu-a1-m1-cB_5jvu-a1-m1-cA
5 6pf2-a1-m1-cA 157 78 0.6250 0.3503 0.7051 1.43e-30 6pf2-a1-m1-cB_6pf2-a1-m1-cA
6 5jvm-a1-m1-cB 79 86 0.6705 0.7468 0.6860 5.52e-30 5jvm-a1-m1-cB_5jvm-a1-m1-cA
7 3mtu-a2-m1-cA 72 70 0.6023 0.7361 0.7571 3.31e-29 3mtu-a2-m1-cB_3mtu-a2-m1-cA
8 5jv3-a2-m1-cD 68 80 0.5795 0.7500 0.6375 7.56e-27 5jv3-a2-m1-cC_5jv3-a2-m1-cD
9 4xa1-a1-m1-cB 155 44 0.4773 0.2710 0.9545 2.08e-25 4xa1-a1-m1-cA_4xa1-a1-m1-cB
10 6pfp-a2-m1-cD 156 47 0.4886 0.2756 0.9149 4.51e-25 6pfp-a2-m1-cC_6pfp-a2-m1-cD
11 6pfp-a2-m1-cC 156 47 0.4886 0.2756 0.9149 4.51e-25 6pfp-a2-m1-cC_6pfp-a2-m1-cD
12 6pf2-a1-m1-cB 150 72 0.5568 0.3267 0.6806 5.02e-25 6pf2-a1-m1-cB_6pf2-a1-m1-cA
13 5jvu-a1-m1-cB 69 78 0.5568 0.7101 0.6282 8.84e-25 5jvu-a1-m1-cB_5jvu-a1-m1-cA
14 4xa1-a1-m1-cA 153 42 0.4545 0.2614 0.9524 4.41e-24 4xa1-a1-m1-cA_4xa1-a1-m1-cB
15 3mtu-a2-m1-cD 64 64 0.5341 0.7344 0.7344 7.58e-24 3mtu-a2-m1-cD_3mtu-a2-m1-cB
16 5jv3-a2-m1-cC 64 76 0.5341 0.7344 0.6184 8.94e-24 5jv3-a2-m1-cC_5jv3-a2-m1-cD
17 3mtu-a2-m1-cB 65 63 0.5227 0.7077 0.7302 3.13e-23 3mtu-a2-m1-cB_3mtu-a2-m1-cA, 3mtu-a2-m1-cD_3mtu-a2-m1-cB
18 6yf5-a2-m1-cD 82 36 0.4091 0.4390 1.0000 3.51e-21 6yf5-a2-m1-cD_6yf5-a2-m1-cC
19 6yf5-a2-m1-cC 87 36 0.4091 0.4138 1.0000 3.88e-21 6yf5-a2-m1-cD_6yf5-a2-m1-cC
20 4xa6-a2-m1-cC 100 38 0.4091 0.3600 0.9474 2.53e-19 4xa6-a2-m1-cD_4xa6-a2-m1-cC
21 5jx1-a1-m2-cA 64 43 0.4205 0.5781 0.8605 2.65e-19 5jx1-a1-m1-cA_5jx1-a1-m2-cA
22 5jx1-a1-m1-cA 64 43 0.4205 0.5781 0.8605 2.65e-19 5jx1-a1-m1-cA_5jx1-a1-m2-cA
23 4xa6-a2-m1-cD 93 37 0.3977 0.3763 0.9459 1.89e-18 4xa6-a2-m1-cD_4xa6-a2-m1-cC
24 4xa6-a1-m1-cA 149 107 0.5568 0.3289 0.4579 3.66e-18 4xa6-a1-m1-cB_4xa6-a1-m1-cA
25 4xa6-a1-m1-cB 146 106 0.5341 0.3219 0.4434 3.88e-15 4xa6-a1-m1-cB_4xa6-a1-m1-cA
26 4xa3-a1-m1-cA 142 41 0.3636 0.2254 0.7805 6.58e-15 4xa3-a1-m1-cA_4xa3-a1-m1-cB
27 4xa3-a1-m1-cB 142 40 0.3523 0.2183 0.7750 7.65e-14 4xa3-a1-m1-cA_4xa3-a1-m1-cB
28 4e61-a1-m1-cA 91 55 0.2955 0.2857 0.4727 9.64e-07 4e61-a1-m1-cB_4e61-a1-m1-cA
29 5m9e-a2-m1-cD 70 45 0.2386 0.3000 0.4667 2.88e-06 5m9e-a2-m1-cC_5m9e-a2-m1-cD
30 5m9e-a2-m1-cC 68 44 0.2386 0.3088 0.4773 4.95e-06 5m9e-a2-m1-cC_5m9e-a2-m1-cD
31 4e61-a1-m1-cB 84 49 0.2386 0.2500 0.4286 0.001 4e61-a1-m1-cB_4e61-a1-m1-cA
32 7n61-a1-m1-c0A 467 52 0.2045 0.0385 0.3462 0.28 7n61-a1-m1-c0A_7n61-a1-m1-c0D
33 7n61-a1-m1-c0D 476 52 0.2045 0.0378 0.3462 0.30 7n61-a1-m1-c0A_7n61-a1-m1-c0D
34 7som-a1-m1-cR 433 45 0.1932 0.0393 0.3778 1.3 7som-a1-m1-cS_7som-a1-m1-cR
35 7som-a1-m1-cS 432 45 0.1932 0.0394 0.3778 1.4 7som-a1-m1-cS_7som-a1-m1-cR
36 6n2g-a1-m1-cA 285 55 0.1932 0.0596 0.3091 3.2 6n2g-a1-m2-cD_6n2g-a1-m1-cA
37 6n2g-a1-m2-cD 273 55 0.1932 0.0623 0.3091 3.2 6n2g-a1-m2-cD_6n2g-a1-m1-cA
38 5doc-a1-m1-cA 197 49 0.1477 0.0660 0.2653 3.4 5doc-a1-m1-cA_5doc-a1-m1-cB
39 5doc-a1-m1-cB 202 49 0.1477 0.0644 0.2653 3.7 5doc-a1-m1-cA_5doc-a1-m1-cB
40 7vzr-a1-m1-cA 854 40 0.1591 0.0164 0.3500 5.6 7vzr-a1-m1-cA_7vzr-a1-m1-ca
41 7vzr-a1-m1-ca 858 40 0.1591 0.0163 0.3500 5.6 7vzr-a1-m1-cA_7vzr-a1-m1-ca

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600