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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=80)
LSNFQGKVMMTVNATDVTDVITIPTAAGKNLCIVRAMDVGYMCDDTITYECPVLSAGNDP
EDIDCWCTKSAVYVRYGRCT

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3ixx-a1-m9-cF 80 80 1.0000 1.0000 1.0000 2.84e-55 3ixx-a1-m9-cE_3ixx-a1-m9-cF
2 3ixx-a1-m9-cE 80 80 1.0000 1.0000 1.0000 2.84e-55 3ixx-a1-m9-cE_3ixx-a1-m9-cF
3 3j42-a1-m9-cF 81 80 0.4375 0.4321 0.4375 1.35e-20 3j42-a1-m9-cE_3j42-a1-m9-cF
4 3j42-a1-m9-cE 81 80 0.4375 0.4321 0.4375 1.35e-20 3j42-a1-m9-cE_3j42-a1-m9-cF
5 8fe4-a1-m9-cD 80 80 0.4250 0.4250 0.4250 5.78e-18 8fe4-a1-m9-cB_8fe4-a1-m9-cD
6 8fe4-a1-m9-cB 80 80 0.4250 0.4250 0.4250 5.78e-18 8fe4-a1-m9-cB_8fe4-a1-m9-cD
7 4b03-a1-m9-cF 166 80 0.3750 0.1807 0.3750 5.41e-17 4b03-a1-m10-cE_4b03-a1-m9-cF
8 4b03-a1-m9-cE 166 80 0.3750 0.1807 0.3750 5.41e-17 4b03-a1-m9-cD_4b03-a1-m9-cE
9 4b03-a1-m9-cD 166 80 0.3750 0.1807 0.3750 5.41e-17 4b03-a1-m54-cD_4b03-a1-m9-cD, 4b03-a1-m9-cD_4b03-a1-m9-cE
10 4b03-a1-m54-cD 166 80 0.3750 0.1807 0.3750 5.41e-17 4b03-a1-m54-cD_4b03-a1-m9-cD
11 4b03-a1-m10-cE 166 80 0.3750 0.1807 0.3750 5.41e-17 4b03-a1-m10-cE_4b03-a1-m9-cF
12 7e0l-a2-m1-cM 483 35 0.1875 0.0311 0.4286 0.085 7e0l-a2-m1-cM_7e0l-a2-m1-cK
13 7e0l-a2-m1-cK 486 37 0.1875 0.0309 0.4054 0.16 7e0l-a2-m1-cM_7e0l-a2-m1-cK
14 1kkm-a1-m2-cB 177 38 0.1875 0.0847 0.3947 4.5 1kkm-a1-m1-cA_1kkm-a1-m2-cB, 1kkm-a1-m2-cA_1kkm-a1-m2-cB
15 1kkm-a1-m2-cA 176 38 0.1875 0.0852 0.3947 4.5 1kkm-a1-m1-cA_1kkm-a1-m2-cA, 1kkm-a1-m2-cA_1kkm-a1-m2-cB
16 1kkm-a1-m1-cA 176 38 0.1875 0.0852 0.3947 4.5 1kkm-a1-m1-cA_1kkm-a1-m2-cA, 1kkm-a1-m1-cA_1kkm-a1-m2-cB
17 3jtj-a1-m2-cA 244 23 0.1375 0.0451 0.4783 7.3 3jtj-a1-m1-cA_3jtj-a1-m2-cA
18 3jtj-a1-m1-cA 244 23 0.1375 0.0451 0.4783 7.3 3jtj-a1-m1-cA_3jtj-a1-m2-cA

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Reference:
Jacob Schwartz et al.

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