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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=47)
LSQENTQIRDLQQENRELWISLEEHQDALELIMSKYRKQMLQLMVAK

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 6akl-a1-m1-cA 52 47 1.0000 0.9038 1.0000 8.69e-28 6akl-a1-m1-cB_6akl-a1-m1-cA
2 6akl-a1-m1-cB 47 47 1.0000 1.0000 1.0000 1.24e-27 6akl-a1-m1-cB_6akl-a1-m1-cA
3 6akk-a1-m2-cA 49 47 1.0000 0.9592 1.0000 1.24e-27 6akk-a1-m2-cB_6akk-a1-m2-cA
4 6akk-a1-m1-cA 49 47 1.0000 0.9592 1.0000 1.24e-27 6akk-a1-m2-cB_6akk-a1-m1-cA
5 6akk-a1-m2-cB 48 46 0.9787 0.9583 1.0000 7.21e-27 6akk-a1-m1-cB_6akk-a1-m2-cB, 6akk-a1-m2-cB_6akk-a1-m1-cA, 6akk-a1-m2-cB_6akk-a1-m2-cA
6 6akk-a1-m1-cB 48 46 0.9787 0.9583 1.0000 7.21e-27 6akk-a1-m1-cB_6akk-a1-m2-cB
7 6pw5-a1-m1-cC 734 31 0.2340 0.0150 0.3548 6.4 6pw5-a1-m1-cC_6pw5-a1-m1-cD
8 6pw5-a1-m1-cD 782 31 0.2340 0.0141 0.3548 7.0 6pw5-a1-m1-cC_6pw5-a1-m1-cD

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Reference:
Jacob Schwartz et al.

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