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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=99)
LSSEELVKQLMEEIKTATEDRKIDQEVLQMRLSHLEQRMVEDLESLSTLQSELLEKIELL
DYSSSIKQIGENLKVLDRSLKPVITTVSLMVEKVDLLYG

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 8b8d-a1-m1-cC 101 99 1.0000 0.9802 1.0000 3.14e-63 8b8d-a1-m1-cC_8b8d-a1-m1-cD
2 8b8d-a1-m1-cB 99 99 1.0000 1.0000 1.0000 3.64e-63 8b8d-a1-m1-cB_8b8d-a1-m1-cA, 8b8d-a1-m1-cB_8b8d-a1-m1-cD
3 8b8d-a1-m1-cD 103 98 0.9899 0.9515 1.0000 6.98e-63 8b8d-a1-m1-cA_8b8d-a1-m1-cD, 8b8d-a1-m1-cB_8b8d-a1-m1-cD, 8b8d-a1-m1-cC_8b8d-a1-m1-cD
4 8b8d-a1-m1-cA 100 98 0.9899 0.9800 1.0000 7.66e-63 8b8d-a1-m1-cA_8b8d-a1-m1-cD, 8b8d-a1-m1-cB_8b8d-a1-m1-cA
5 8b8b-a1-m1-cD 97 96 0.4343 0.4433 0.4479 5.15e-20 8b8b-a1-m1-cC_8b8b-a1-m1-cD, 8b8b-a1-m1-cD_8b8b-a1-m1-cA
6 8b8b-a1-m1-cA 99 96 0.4343 0.4343 0.4479 5.61e-20 8b8b-a1-m1-cD_8b8b-a1-m1-cA
7 8b8b-a1-m1-cC 95 93 0.4141 0.4316 0.4409 9.59e-19 8b8b-a1-m1-cC_8b8b-a1-m1-cD
8 6uek-a2-m1-cC 641 33 0.1414 0.0218 0.4242 8.4 6uek-a2-m1-cD_6uek-a2-m1-cC

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Reference:
Jacob Schwartz et al.

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