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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=70)
LTAALRDVRQQYESVAAKNLQEAEEWYKSKFADLSEAANRNNDALRQAKQESTEYRRQVQ
SLTCEVDALK

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3klt-a3-m1-cD 70 70 1.0000 1.0000 1.0000 5.08e-45 3klt-a3-m1-cD_3klt-a3-m1-cC
2 3klt-a1-m1-cD 70 70 1.0000 1.0000 1.0000 5.08e-45 3klt-a1-m1-cD_3klt-a1-m1-cA, 3klt-a1-m1-cD_3klt-a1-m1-cB
3 3klt-a1-m1-cB 71 70 1.0000 0.9859 1.0000 6.09e-45 3klt-a1-m1-cD_3klt-a1-m1-cB
4 3klt-a1-m1-cA 71 70 1.0000 0.9859 1.0000 6.09e-45 3klt-a1-m1-cD_3klt-a1-m1-cA
5 3klt-a3-m1-cC 71 69 0.9857 0.9718 1.0000 2.81e-44 3klt-a3-m1-cD_3klt-a3-m1-cC
6 3trt-a1-m1-cA 73 67 0.9286 0.8904 0.9701 1.02e-38 3trt-a1-m1-cB_3trt-a1-m1-cA
7 3trt-a1-m1-cB 71 67 0.9286 0.9155 0.9701 1.27e-38 3trt-a1-m1-cB_3trt-a1-m1-cA
8 7x5d-a1-m2-cA 99 67 0.2571 0.1818 0.2687 0.19 7x5d-a1-m2-cB_7x5d-a1-m2-cA
9 7x5d-a1-m1-cA 99 67 0.2571 0.1818 0.2687 0.19 7x5d-a1-m2-cB_7x5d-a1-m1-cA
10 7x5d-a1-m2-cB 94 67 0.2571 0.1915 0.2687 0.21 7x5d-a1-m2-cB_7x5d-a1-m1-cA, 7x5d-a1-m2-cB_7x5d-a1-m2-cA
11 2oso-a1-m2-cA 152 38 0.1286 0.0592 0.2368 2.2 2oso-a1-m1-cA_2oso-a1-m2-cA
12 2oso-a1-m1-cA 152 38 0.1286 0.0592 0.2368 2.2 2oso-a1-m1-cA_2oso-a1-m2-cA

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Reference:
Jacob Schwartz et al.

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