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HomodimerDB
>protein (length=59)
LTCVTDITEECAAGQKICFKNWKKMGPKLYDVKRGCTATCPKADDNGCVKCCNTDKCNK

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 7c28-a1-m1-cB 59 59 1.0000 1.0000 1.0000 1.15e-37 7c28-a1-m1-cB_7c28-a1-m1-cA
2 7c28-a1-m1-cA 65 65 1.0000 0.9077 0.9077 3.61e-35 7c28-a1-m1-cB_7c28-a1-m1-cA
3 1ff4-a2-m3-cA 65 64 0.5932 0.5385 0.5469 1.71e-18 1ff4-a2-m1-cA_1ff4-a2-m3-cA
4 1ff4-a2-m1-cA 65 64 0.5932 0.5385 0.5469 1.71e-18 1ff4-a2-m1-cA_1ff4-a2-m3-cA
5 1ff4-a1-m2-cA 65 64 0.5932 0.5385 0.5469 1.71e-18 1ff4-a1-m1-cA_1ff4-a1-m2-cA
6 1ff4-a1-m1-cA 65 64 0.5932 0.5385 0.5469 1.71e-18 1ff4-a1-m1-cA_1ff4-a1-m2-cA
7 3neq-a3-m2-cA 66 66 0.5254 0.4697 0.4697 3.43e-15 3neq-a3-m1-cB_3neq-a3-m2-cA
8 3neq-a3-m1-cB 66 66 0.5254 0.4697 0.4697 3.43e-15 3neq-a3-m1-cB_3neq-a3-m2-cA
9 4do8-a3-m2-cB 66 66 0.5085 0.4545 0.4545 1.54e-12 4do8-a3-m1-cA_4do8-a3-m2-cB, 4do8-a3-m1-cB_4do8-a3-m2-cB, 4do8-a3-m2-cA_4do8-a3-m2-cB
10 4do8-a3-m2-cA 66 66 0.5085 0.4545 0.4545 1.54e-12 4do8-a3-m2-cA_4do8-a3-m2-cB
11 4do8-a3-m1-cB 66 66 0.5085 0.4545 0.4545 1.54e-12 4do8-a3-m1-cB_4do8-a3-m2-cB
12 4do8-a3-m1-cA 66 66 0.5085 0.4545 0.4545 1.54e-12 4do8-a3-m1-cA_4do8-a3-m2-cB
13 4zqy-a2-m1-cC 65 59 0.4068 0.3692 0.4068 6.80e-09 4zqy-a2-m1-cB_4zqy-a2-m1-cC
14 4zqy-a2-m1-cB 65 59 0.4068 0.3692 0.4068 6.80e-09 4zqy-a2-m1-cB_4zqy-a2-m1-cC
15 1xt3-a1-m2-cB 60 55 0.3898 0.3833 0.4182 1.60e-07 1xt3-a1-m1-cA_1xt3-a1-m2-cB
16 1xt3-a1-m1-cA 60 55 0.3898 0.3833 0.4182 1.60e-07 1xt3-a1-m1-cA_1xt3-a1-m2-cB
17 1kxi-a1-m1-cB 62 57 0.4068 0.3871 0.4211 3.12e-07 1kxi-a1-m1-cA_1kxi-a1-m1-cB
18 1kxi-a1-m1-cA 62 57 0.4068 0.3871 0.4211 3.12e-07 1kxi-a1-m1-cA_1kxi-a1-m1-cB
19 3vts-a1-m1-cB 61 55 0.3898 0.3770 0.4182 5.27e-07 3vts-a1-m1-cA_3vts-a1-m1-cB
20 3vts-a1-m1-cA 61 55 0.3898 0.3770 0.4182 5.27e-07 3vts-a1-m1-cA_3vts-a1-m1-cB
21 1tgx-a4-m15-cC 60 55 0.3559 0.3500 0.3818 2.09e-06 1tgx-a4-m14-cB_1tgx-a4-m15-cC
22 1tgx-a4-m14-cB 60 55 0.3559 0.3500 0.3818 2.09e-06 1tgx-a4-m14-cB_1tgx-a4-m15-cC
23 1tgx-a3-m9-cA 60 55 0.3559 0.3500 0.3818 2.09e-06 1tgx-a3-m10-cB_1tgx-a3-m9-cA
24 1tgx-a3-m10-cB 60 55 0.3559 0.3500 0.3818 2.09e-06 1tgx-a3-m10-cB_1tgx-a3-m9-cA
25 1tgx-a1-m4-cC 60 55 0.3559 0.3500 0.3818 2.09e-06 1tgx-a1-m4-cA_1tgx-a1-m4-cC
26 1tgx-a1-m4-cA 60 55 0.3559 0.3500 0.3818 2.09e-06 1tgx-a1-m4-cA_1tgx-a1-m4-cC
27 4om4-a1-m1-cE 60 55 0.3559 0.3500 0.3818 5.36e-05 4om4-a1-m1-cA_4om4-a1-m1-cE, 4om4-a1-m1-cC_4om4-a1-m1-cE, 4om4-a1-m1-cD_4om4-a1-m1-cE
28 4om4-a1-m1-cD 60 55 0.3559 0.3500 0.3818 5.36e-05 4om4-a1-m1-cD_4om4-a1-m1-cE
29 4om4-a1-m1-cC 60 55 0.3559 0.3500 0.3818 5.36e-05 4om4-a1-m1-cA_4om4-a1-m1-cC, 4om4-a1-m1-cC_4om4-a1-m1-cE
30 4om4-a1-m1-cB 60 55 0.3559 0.3500 0.3818 5.36e-05 4om4-a1-m1-cA_4om4-a1-m1-cB
31 4om4-a1-m1-cA 60 55 0.3559 0.3500 0.3818 5.36e-05 4om4-a1-m1-cA_4om4-a1-m1-cB, 4om4-a1-m1-cA_4om4-a1-m1-cC, 4om4-a1-m1-cA_4om4-a1-m1-cE
32 4om5-a1-m1-cC 60 55 0.3559 0.3500 0.3818 6.31e-05 4om5-a1-m1-cA_4om5-a1-m1-cC
33 4om5-a1-m1-cB 60 55 0.3559 0.3500 0.3818 6.31e-05 4om5-a1-m1-cA_4om5-a1-m1-cB
34 4om5-a1-m1-cA 60 55 0.3559 0.3500 0.3818 6.31e-05 4om5-a1-m1-cA_4om5-a1-m1-cB, 4om5-a1-m1-cA_4om5-a1-m1-cC
35 4lft-a1-m1-cB 72 59 0.3898 0.3194 0.3898 8.56e-05 4lft-a1-m1-cA_4lft-a1-m1-cB
36 1cdt-a1-m1-cB 60 53 0.3729 0.3667 0.4151 2.69e-04 1cdt-a1-m1-cA_1cdt-a1-m1-cB
37 1cdt-a1-m1-cA 60 53 0.3729 0.3667 0.4151 2.69e-04 1cdt-a1-m1-cA_1cdt-a1-m1-cB
38 4lft-a1-m1-cA 64 58 0.3729 0.3438 0.3793 2.88e-04 4lft-a1-m1-cA_4lft-a1-m1-cB
39 3hh7-a1-m1-cB 65 56 0.3729 0.3385 0.3929 5.28e-04 3hh7-a1-m1-cA_3hh7-a1-m1-cB
40 3hh7-a1-m1-cA 65 56 0.3729 0.3385 0.3929 5.28e-04 3hh7-a1-m1-cA_3hh7-a1-m1-cB
41 4bdt-a2-m6-cB 61 46 0.3390 0.3279 0.4348 0.001 4bdt-a2-m4-cB_4bdt-a2-m6-cB
42 4bdt-a2-m4-cB 61 46 0.3390 0.3279 0.4348 0.001 4bdt-a2-m4-cB_4bdt-a2-m6-cB
43 1fsc-a1-m2-cA 61 46 0.3390 0.3279 0.4348 0.001 1fsc-a1-m1-cA_1fsc-a1-m2-cA
44 1fsc-a1-m1-cA 61 46 0.3390 0.3279 0.4348 0.001 1fsc-a1-m1-cA_1fsc-a1-m2-cA
45 1v6p-a1-m1-cB 62 55 0.3220 0.3065 0.3455 0.009 1v6p-a1-m1-cA_1v6p-a1-m1-cB
46 1v6p-a1-m1-cA 62 55 0.3220 0.3065 0.3455 0.009 1v6p-a1-m1-cA_1v6p-a1-m1-cB
47 2abx-a1-m1-cB 74 52 0.3390 0.2703 0.3846 0.016 2abx-a1-m1-cA_2abx-a1-m1-cB
48 2abx-a1-m1-cA 74 52 0.3390 0.2703 0.3846 0.016 2abx-a1-m1-cA_2abx-a1-m1-cB
49 6zfm-a1-m1-cE 65 55 0.3220 0.2923 0.3455 0.025 6zfm-a1-m1-cE_6zfm-a1-m1-cA
50 4aea-a2-m2-cB 67 27 0.2203 0.1940 0.4815 0.22 4aea-a2-m1-cB_4aea-a2-m2-cB
51 4aea-a2-m1-cB 67 27 0.2203 0.1940 0.4815 0.22 4aea-a2-m1-cB_4aea-a2-m2-cB
52 6zfm-a1-m1-cD 71 27 0.2203 0.1831 0.4815 0.25 6zfm-a1-m1-cA_6zfm-a1-m1-cD
53 6zfm-a1-m1-cA 71 27 0.2203 0.1831 0.4815 0.25 6zfm-a1-m1-cA_6zfm-a1-m1-cD, 6zfm-a1-m1-cE_6zfm-a1-m1-cA
54 2ctx-a1-m2-cA 71 27 0.2203 0.1831 0.4815 0.25 2ctx-a1-m1-cA_2ctx-a1-m2-cA
55 2ctx-a1-m1-cA 71 27 0.2203 0.1831 0.4815 0.25 2ctx-a1-m1-cA_2ctx-a1-m2-cA
56 5xwe-a1-m1-cB 50 57 0.2712 0.3200 0.2807 2.8 5xwe-a1-m1-cB_5xwe-a1-m1-cA
57 3ee6-a2-m2-cB 529 19 0.1356 0.0151 0.4211 3.5 3ee6-a2-m1-cA_3ee6-a2-m2-cB, 3ee6-a2-m2-cA_3ee6-a2-m2-cB
58 3ee6-a2-m2-cA 529 19 0.1356 0.0151 0.4211 3.5 3ee6-a2-m2-cA_3ee6-a2-m2-cB
59 3ee6-a2-m1-cA 529 19 0.1356 0.0151 0.4211 3.5 3ee6-a2-m1-cA_3ee6-a2-m2-cB
60 5xwe-a1-m1-cA 51 54 0.2542 0.2941 0.2778 6.0 5xwe-a1-m1-cB_5xwe-a1-m1-cA

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Reference:
Jacob Schwartz et al.

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