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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=65)
LTCVTDKSFGGVITEECAAGQKICFKNWKKMGPKLYDVKRGCTATCPKADDNGCVKCCNT
DKCNK

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 7c28-a1-m1-cA 65 65 1.0000 1.0000 1.0000 2.58e-42 7c28-a1-m1-cB_7c28-a1-m1-cA
2 7c28-a1-m1-cB 59 65 0.9077 1.0000 0.9077 3.98e-35 7c28-a1-m1-cB_7c28-a1-m1-cA
3 1ff4-a2-m3-cA 65 64 0.6154 0.6154 0.6250 7.63e-25 1ff4-a2-m1-cA_1ff4-a2-m3-cA
4 1ff4-a2-m1-cA 65 64 0.6154 0.6154 0.6250 7.63e-25 1ff4-a2-m1-cA_1ff4-a2-m3-cA
5 1ff4-a1-m2-cA 65 64 0.6154 0.6154 0.6250 7.63e-25 1ff4-a1-m1-cA_1ff4-a1-m2-cA
6 1ff4-a1-m1-cA 65 64 0.6154 0.6154 0.6250 7.63e-25 1ff4-a1-m1-cA_1ff4-a1-m2-cA
7 3neq-a3-m2-cA 66 66 0.4923 0.4848 0.4848 7.99e-18 3neq-a3-m1-cB_3neq-a3-m2-cA
8 3neq-a3-m1-cB 66 66 0.4923 0.4848 0.4848 7.99e-18 3neq-a3-m1-cB_3neq-a3-m2-cA
9 4do8-a3-m2-cB 66 66 0.5077 0.5000 0.5000 1.14e-17 4do8-a3-m1-cA_4do8-a3-m2-cB, 4do8-a3-m1-cB_4do8-a3-m2-cB, 4do8-a3-m2-cA_4do8-a3-m2-cB
10 4do8-a3-m2-cA 66 66 0.5077 0.5000 0.5000 1.14e-17 4do8-a3-m2-cA_4do8-a3-m2-cB
11 4do8-a3-m1-cB 66 66 0.5077 0.5000 0.5000 1.14e-17 4do8-a3-m1-cB_4do8-a3-m2-cB
12 4do8-a3-m1-cA 66 66 0.5077 0.5000 0.5000 1.14e-17 4do8-a3-m1-cA_4do8-a3-m2-cB
13 4zqy-a2-m1-cC 65 63 0.4154 0.4154 0.4286 1.79e-10 4zqy-a2-m1-cB_4zqy-a2-m1-cC
14 4zqy-a2-m1-cB 65 63 0.4154 0.4154 0.4286 1.79e-10 4zqy-a2-m1-cB_4zqy-a2-m1-cC
15 1xt3-a1-m2-cB 60 53 0.3385 0.3667 0.4151 2.32e-07 1xt3-a1-m1-cA_1xt3-a1-m2-cB
16 1xt3-a1-m1-cA 60 53 0.3385 0.3667 0.4151 2.32e-07 1xt3-a1-m1-cA_1xt3-a1-m2-cB
17 1kxi-a1-m1-cB 62 53 0.3538 0.3710 0.4340 3.87e-07 1kxi-a1-m1-cA_1kxi-a1-m1-cB
18 1kxi-a1-m1-cA 62 53 0.3538 0.3710 0.4340 3.87e-07 1kxi-a1-m1-cA_1kxi-a1-m1-cB
19 3vts-a1-m1-cB 61 52 0.3385 0.3607 0.4231 9.90e-07 3vts-a1-m1-cA_3vts-a1-m1-cB
20 3vts-a1-m1-cA 61 52 0.3385 0.3607 0.4231 9.90e-07 3vts-a1-m1-cA_3vts-a1-m1-cB
21 1tgx-a4-m15-cC 60 50 0.3231 0.3500 0.4200 3.88e-06 1tgx-a4-m14-cB_1tgx-a4-m15-cC
22 1tgx-a4-m14-cB 60 50 0.3231 0.3500 0.4200 3.88e-06 1tgx-a4-m14-cB_1tgx-a4-m15-cC
23 1tgx-a3-m9-cA 60 50 0.3231 0.3500 0.4200 3.88e-06 1tgx-a3-m10-cB_1tgx-a3-m9-cA
24 1tgx-a3-m10-cB 60 50 0.3231 0.3500 0.4200 3.88e-06 1tgx-a3-m10-cB_1tgx-a3-m9-cA
25 1tgx-a1-m4-cC 60 50 0.3231 0.3500 0.4200 3.88e-06 1tgx-a1-m4-cA_1tgx-a1-m4-cC
26 1tgx-a1-m4-cA 60 50 0.3231 0.3500 0.4200 3.88e-06 1tgx-a1-m4-cA_1tgx-a1-m4-cC
27 4om4-a1-m1-cE 60 53 0.3077 0.3333 0.3774 7.43e-05 4om4-a1-m1-cA_4om4-a1-m1-cE, 4om4-a1-m1-cC_4om4-a1-m1-cE, 4om4-a1-m1-cD_4om4-a1-m1-cE
28 4om4-a1-m1-cD 60 53 0.3077 0.3333 0.3774 7.43e-05 4om4-a1-m1-cD_4om4-a1-m1-cE
29 4om4-a1-m1-cC 60 53 0.3077 0.3333 0.3774 7.43e-05 4om4-a1-m1-cA_4om4-a1-m1-cC, 4om4-a1-m1-cC_4om4-a1-m1-cE
30 4om4-a1-m1-cB 60 53 0.3077 0.3333 0.3774 7.43e-05 4om4-a1-m1-cA_4om4-a1-m1-cB
31 4om4-a1-m1-cA 60 53 0.3077 0.3333 0.3774 7.43e-05 4om4-a1-m1-cA_4om4-a1-m1-cB, 4om4-a1-m1-cA_4om4-a1-m1-cC, 4om4-a1-m1-cA_4om4-a1-m1-cE
32 4om5-a1-m1-cC 60 53 0.3077 0.3333 0.3774 8.38e-05 4om5-a1-m1-cA_4om5-a1-m1-cC
33 4om5-a1-m1-cB 60 53 0.3077 0.3333 0.3774 8.38e-05 4om5-a1-m1-cA_4om5-a1-m1-cB
34 4om5-a1-m1-cA 60 53 0.3077 0.3333 0.3774 8.38e-05 4om5-a1-m1-cA_4om5-a1-m1-cB, 4om5-a1-m1-cA_4om5-a1-m1-cC
35 1cdt-a1-m1-cB 60 56 0.3385 0.3667 0.3929 2.23e-04 1cdt-a1-m1-cA_1cdt-a1-m1-cB
36 1cdt-a1-m1-cA 60 56 0.3385 0.3667 0.3929 2.23e-04 1cdt-a1-m1-cA_1cdt-a1-m1-cB
37 3hh7-a1-m1-cB 65 65 0.3692 0.3692 0.3692 2.66e-04 3hh7-a1-m1-cA_3hh7-a1-m1-cB
38 3hh7-a1-m1-cA 65 65 0.3692 0.3692 0.3692 2.66e-04 3hh7-a1-m1-cA_3hh7-a1-m1-cB
39 4lft-a1-m1-cB 72 52 0.3385 0.3056 0.4231 5.13e-04 4lft-a1-m1-cA_4lft-a1-m1-cB
40 4bdt-a2-m6-cB 61 63 0.3538 0.3770 0.3651 0.002 4bdt-a2-m4-cB_4bdt-a2-m6-cB
41 4bdt-a2-m4-cB 61 63 0.3538 0.3770 0.3651 0.002 4bdt-a2-m4-cB_4bdt-a2-m6-cB
42 1fsc-a1-m2-cA 61 63 0.3538 0.3770 0.3651 0.002 1fsc-a1-m1-cA_1fsc-a1-m2-cA
43 1fsc-a1-m1-cA 61 63 0.3538 0.3770 0.3651 0.002 1fsc-a1-m1-cA_1fsc-a1-m2-cA
44 4lft-a1-m1-cA 64 51 0.3231 0.3281 0.4118 0.002 4lft-a1-m1-cA_4lft-a1-m1-cB
45 1v6p-a1-m1-cB 62 65 0.3231 0.3387 0.3231 0.002 1v6p-a1-m1-cA_1v6p-a1-m1-cB
46 1v6p-a1-m1-cA 62 65 0.3231 0.3387 0.3231 0.002 1v6p-a1-m1-cA_1v6p-a1-m1-cB
47 2abx-a1-m1-cB 74 52 0.3077 0.2703 0.3846 0.018 2abx-a1-m1-cA_2abx-a1-m1-cB
48 2abx-a1-m1-cA 74 52 0.3077 0.2703 0.3846 0.018 2abx-a1-m1-cA_2abx-a1-m1-cB
49 6zfm-a1-m1-cE 65 54 0.2769 0.2769 0.3333 0.16 6zfm-a1-m1-cE_6zfm-a1-m1-cA
50 4aea-a2-m2-cB 67 27 0.2000 0.1940 0.4815 0.27 4aea-a2-m1-cB_4aea-a2-m2-cB
51 4aea-a2-m1-cB 67 27 0.2000 0.1940 0.4815 0.27 4aea-a2-m1-cB_4aea-a2-m2-cB
52 6zfm-a1-m1-cD 71 27 0.2000 0.1831 0.4815 0.30 6zfm-a1-m1-cA_6zfm-a1-m1-cD
53 6zfm-a1-m1-cA 71 27 0.2000 0.1831 0.4815 0.30 6zfm-a1-m1-cA_6zfm-a1-m1-cD, 6zfm-a1-m1-cE_6zfm-a1-m1-cA
54 2ctx-a1-m2-cA 71 27 0.2000 0.1831 0.4815 0.30 2ctx-a1-m1-cA_2ctx-a1-m2-cA
55 2ctx-a1-m1-cA 71 27 0.2000 0.1831 0.4815 0.30 2ctx-a1-m1-cA_2ctx-a1-m2-cA
56 1qkd-a1-m1-cB 62 63 0.2615 0.2742 0.2698 3.8 1qkd-a1-m1-cA_1qkd-a1-m1-cB
57 1qkd-a1-m1-cA 62 63 0.2615 0.2742 0.2698 3.8 1qkd-a1-m1-cA_1qkd-a1-m1-cB
58 3ee6-a2-m2-cB 529 19 0.1231 0.0151 0.4211 4.4 3ee6-a2-m1-cA_3ee6-a2-m2-cB, 3ee6-a2-m2-cA_3ee6-a2-m2-cB
59 3ee6-a2-m2-cA 529 19 0.1231 0.0151 0.4211 4.4 3ee6-a2-m2-cA_3ee6-a2-m2-cB
60 3ee6-a2-m1-cA 529 19 0.1231 0.0151 0.4211 4.4 3ee6-a2-m1-cA_3ee6-a2-m2-cB

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Reference:
Jacob Schwartz et al.

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