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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=66)
LTCVTSKSIFGITTENCPDGQNLCFKKWYYIVPRYSDITWGCAATCPKPTNVRETIRCCE
TDKCNE

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 4do8-a3-m2-cB 66 66 1.0000 1.0000 1.0000 1.39e-44 4do8-a3-m1-cA_4do8-a3-m2-cB, 4do8-a3-m1-cB_4do8-a3-m2-cB, 4do8-a3-m2-cA_4do8-a3-m2-cB
2 4do8-a3-m2-cA 66 66 1.0000 1.0000 1.0000 1.39e-44 4do8-a3-m2-cA_4do8-a3-m2-cB
3 4do8-a3-m1-cB 66 66 1.0000 1.0000 1.0000 1.39e-44 4do8-a3-m1-cB_4do8-a3-m2-cB
4 4do8-a3-m1-cA 66 66 1.0000 1.0000 1.0000 1.39e-44 4do8-a3-m1-cA_4do8-a3-m2-cB
5 3neq-a3-m2-cA 66 66 0.7576 0.7576 0.7576 5.28e-31 3neq-a3-m1-cB_3neq-a3-m2-cA
6 3neq-a3-m1-cB 66 66 0.7576 0.7576 0.7576 5.28e-31 3neq-a3-m1-cB_3neq-a3-m2-cA
7 1ff4-a2-m3-cA 65 66 0.6515 0.6615 0.6515 7.42e-26 1ff4-a2-m1-cA_1ff4-a2-m3-cA
8 1ff4-a2-m1-cA 65 66 0.6515 0.6615 0.6515 7.42e-26 1ff4-a2-m1-cA_1ff4-a2-m3-cA
9 1ff4-a1-m2-cA 65 66 0.6515 0.6615 0.6515 7.42e-26 1ff4-a1-m1-cA_1ff4-a1-m2-cA
10 1ff4-a1-m1-cA 65 66 0.6515 0.6615 0.6515 7.42e-26 1ff4-a1-m1-cA_1ff4-a1-m2-cA
11 7c28-a1-m1-cA 65 66 0.5000 0.5077 0.5000 1.15e-17 7c28-a1-m1-cB_7c28-a1-m1-cA
12 4zqy-a2-m1-cC 65 64 0.4545 0.4615 0.4688 5.74e-13 4zqy-a2-m1-cB_4zqy-a2-m1-cC
13 4zqy-a2-m1-cB 65 64 0.4545 0.4615 0.4688 5.74e-13 4zqy-a2-m1-cB_4zqy-a2-m1-cC
14 7c28-a1-m1-cB 59 66 0.4545 0.5085 0.4545 1.72e-12 7c28-a1-m1-cB_7c28-a1-m1-cA
15 1kxi-a1-m1-cB 62 51 0.3333 0.3548 0.4314 7.48e-08 1kxi-a1-m1-cA_1kxi-a1-m1-cB
16 1kxi-a1-m1-cA 62 51 0.3333 0.3548 0.4314 7.48e-08 1kxi-a1-m1-cA_1kxi-a1-m1-cB
17 2abx-a1-m1-cB 74 53 0.3485 0.3108 0.4340 3.88e-07 2abx-a1-m1-cA_2abx-a1-m1-cB
18 2abx-a1-m1-cA 74 53 0.3485 0.3108 0.4340 3.88e-07 2abx-a1-m1-cA_2abx-a1-m1-cB
19 4lft-a1-m1-cA 64 64 0.3788 0.3906 0.3906 9.00e-07 4lft-a1-m1-cA_4lft-a1-m1-cB
20 4lft-a1-m1-cB 72 65 0.3788 0.3472 0.3846 1.05e-06 4lft-a1-m1-cA_4lft-a1-m1-cB
21 3vts-a1-m1-cB 61 58 0.3030 0.3279 0.3448 1.52e-06 3vts-a1-m1-cA_3vts-a1-m1-cB
22 3vts-a1-m1-cA 61 58 0.3030 0.3279 0.3448 1.52e-06 3vts-a1-m1-cA_3vts-a1-m1-cB
23 3hh7-a1-m1-cB 65 64 0.3788 0.3846 0.3906 2.80e-06 3hh7-a1-m1-cA_3hh7-a1-m1-cB
24 3hh7-a1-m1-cA 65 64 0.3788 0.3846 0.3906 2.80e-06 3hh7-a1-m1-cA_3hh7-a1-m1-cB
25 1xt3-a1-m2-cB 60 51 0.2879 0.3167 0.3725 7.48e-06 1xt3-a1-m1-cA_1xt3-a1-m2-cB
26 1xt3-a1-m1-cA 60 51 0.2879 0.3167 0.3725 7.48e-06 1xt3-a1-m1-cA_1xt3-a1-m2-cB
27 1cdt-a1-m1-cB 60 57 0.2879 0.3167 0.3333 1.36e-05 1cdt-a1-m1-cA_1cdt-a1-m1-cB
28 1cdt-a1-m1-cA 60 57 0.2879 0.3167 0.3333 1.36e-05 1cdt-a1-m1-cA_1cdt-a1-m1-cB
29 1tgx-a4-m15-cC 60 51 0.3030 0.3333 0.3922 1.23e-04 1tgx-a4-m14-cB_1tgx-a4-m15-cC
30 1tgx-a4-m14-cB 60 51 0.3030 0.3333 0.3922 1.23e-04 1tgx-a4-m14-cB_1tgx-a4-m15-cC
31 1tgx-a3-m9-cA 60 51 0.3030 0.3333 0.3922 1.23e-04 1tgx-a3-m10-cB_1tgx-a3-m9-cA
32 1tgx-a3-m10-cB 60 51 0.3030 0.3333 0.3922 1.23e-04 1tgx-a3-m10-cB_1tgx-a3-m9-cA
33 1tgx-a1-m4-cC 60 51 0.3030 0.3333 0.3922 1.23e-04 1tgx-a1-m4-cA_1tgx-a1-m4-cC
34 1tgx-a1-m4-cA 60 51 0.3030 0.3333 0.3922 1.23e-04 1tgx-a1-m4-cA_1tgx-a1-m4-cC
35 4om4-a1-m1-cE 60 51 0.2727 0.3000 0.3529 2.12e-04 4om4-a1-m1-cA_4om4-a1-m1-cE, 4om4-a1-m1-cC_4om4-a1-m1-cE, 4om4-a1-m1-cD_4om4-a1-m1-cE
36 4om4-a1-m1-cD 60 51 0.2727 0.3000 0.3529 2.12e-04 4om4-a1-m1-cD_4om4-a1-m1-cE
37 4om4-a1-m1-cC 60 51 0.2727 0.3000 0.3529 2.12e-04 4om4-a1-m1-cA_4om4-a1-m1-cC, 4om4-a1-m1-cC_4om4-a1-m1-cE
38 4om4-a1-m1-cB 60 51 0.2727 0.3000 0.3529 2.12e-04 4om4-a1-m1-cA_4om4-a1-m1-cB
39 4om4-a1-m1-cA 60 51 0.2727 0.3000 0.3529 2.12e-04 4om4-a1-m1-cA_4om4-a1-m1-cB, 4om4-a1-m1-cA_4om4-a1-m1-cC, 4om4-a1-m1-cA_4om4-a1-m1-cE
40 4om5-a1-m1-cC 60 51 0.2727 0.3000 0.3529 2.26e-04 4om5-a1-m1-cA_4om5-a1-m1-cC
41 4om5-a1-m1-cB 60 51 0.2727 0.3000 0.3529 2.26e-04 4om5-a1-m1-cA_4om5-a1-m1-cB
42 4om5-a1-m1-cA 60 51 0.2727 0.3000 0.3529 2.26e-04 4om5-a1-m1-cA_4om5-a1-m1-cB, 4om5-a1-m1-cA_4om5-a1-m1-cC
43 4aea-a2-m2-cB 67 56 0.3333 0.3284 0.3929 2.38e-04 4aea-a2-m1-cB_4aea-a2-m2-cB
44 4aea-a2-m1-cB 67 56 0.3333 0.3284 0.3929 2.38e-04 4aea-a2-m1-cB_4aea-a2-m2-cB
45 6zfm-a1-m1-cD 71 56 0.3333 0.3099 0.3929 3.10e-04 6zfm-a1-m1-cA_6zfm-a1-m1-cD
46 6zfm-a1-m1-cA 71 56 0.3333 0.3099 0.3929 3.10e-04 6zfm-a1-m1-cA_6zfm-a1-m1-cD, 6zfm-a1-m1-cE_6zfm-a1-m1-cA
47 2ctx-a1-m2-cA 71 56 0.3333 0.3099 0.3929 3.10e-04 2ctx-a1-m1-cA_2ctx-a1-m2-cA
48 2ctx-a1-m1-cA 71 56 0.3333 0.3099 0.3929 3.10e-04 2ctx-a1-m1-cA_2ctx-a1-m2-cA
49 6zfm-a1-m1-cE 65 54 0.3030 0.3077 0.3704 0.004 6zfm-a1-m1-cE_6zfm-a1-m1-cA
50 1v6p-a1-m1-cB 62 65 0.3636 0.3871 0.3692 0.057 1v6p-a1-m1-cA_1v6p-a1-m1-cB
51 1v6p-a1-m1-cA 62 65 0.3636 0.3871 0.3692 0.057 1v6p-a1-m1-cA_1v6p-a1-m1-cB
52 5uju-a1-m1-cB 557 35 0.2273 0.0269 0.4286 0.78 5uju-a1-m1-cB_5uju-a1-m1-cA
53 5uju-a1-m1-cA 558 35 0.2273 0.0269 0.4286 0.78 5uju-a1-m1-cB_5uju-a1-m1-cA
54 5xwe-a1-m1-cA 51 54 0.2727 0.3529 0.3333 0.83 5xwe-a1-m1-cB_5xwe-a1-m1-cA
55 5xwe-a1-m1-cB 50 53 0.2576 0.3400 0.3208 3.0 5xwe-a1-m1-cB_5xwe-a1-m1-cA
56 4z3w-a1-m1-cC 653 30 0.1667 0.0168 0.3667 5.3 4z3w-a1-m1-cB_4z3w-a1-m1-cC
57 4z3w-a1-m1-cB 652 30 0.1667 0.0169 0.3667 5.4 4z3w-a1-m1-cB_4z3w-a1-m1-cC
58 1qkd-a1-m1-cB 62 63 0.2879 0.3065 0.3016 6.2 1qkd-a1-m1-cA_1qkd-a1-m1-cB
59 1qkd-a1-m1-cA 62 63 0.2879 0.3065 0.3016 6.2 1qkd-a1-m1-cA_1qkd-a1-m1-cB
60 1mxi-a1-m2-cA 156 49 0.1970 0.0833 0.2653 8.4 1mxi-a1-m1-cA_1mxi-a1-m2-cA
61 1mxi-a1-m1-cA 156 49 0.1970 0.0833 0.2653 8.4 1mxi-a1-m1-cA_1mxi-a1-m2-cA
62 3egw-a1-m2-cA 1244 32 0.1667 0.0088 0.3438 9.9 3egw-a1-m1-cA_3egw-a1-m2-cA
63 3egw-a1-m1-cA 1244 32 0.1667 0.0088 0.3438 9.9 3egw-a1-m1-cA_3egw-a1-m2-cA

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Reference:
Jacob Schwartz et al.

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