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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=90)
LTPFQKQAHNKIEKRYRININTKIARLQQIIPWVASEQTAFEVGDSTKLNKSMILEKAVD
YILYLQNNERLYEMEVQRLKSEIDTLKQDQ

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 7f2f-a1-m1-cA 90 90 1.0000 1.0000 1.0000 1.86e-62 7f2f-a1-m1-cA_7f2f-a1-m1-cB
2 7f2f-a1-m1-cB 94 90 0.9889 0.9468 0.9889 1.32e-59 7f2f-a1-m1-cA_7f2f-a1-m1-cB
3 1am9-a1-m1-cD 76 79 0.3444 0.4079 0.3924 1.33e-11 1am9-a1-m1-cD_1am9-a1-m1-cC
4 1am9-a1-m1-cC 82 68 0.3444 0.3780 0.4559 1.50e-11 1am9-a1-m1-cD_1am9-a1-m1-cC
5 1an4-a1-m1-cB 65 63 0.2889 0.4000 0.4127 4.41e-05 1an4-a1-m1-cA_1an4-a1-m1-cB
6 1an4-a1-m1-cA 65 63 0.2889 0.4000 0.4127 4.41e-05 1an4-a1-m1-cA_1an4-a1-m1-cB
7 7d8t-a1-m1-cB 199 72 0.3000 0.1357 0.3750 1.06e-04 7d8t-a1-m1-cA_7d8t-a1-m1-cB
8 7d8t-a1-m1-cA 199 72 0.3000 0.1357 0.3750 1.06e-04 7d8t-a1-m1-cA_7d8t-a1-m1-cB
9 7d8s-a2-m1-cC 184 68 0.2889 0.1413 0.3824 1.61e-04 7d8s-a2-m1-cD_7d8s-a2-m1-cC
10 5eyo-a2-m2-cC 88 80 0.2222 0.2273 0.2500 0.002 5eyo-a2-m1-cC_5eyo-a2-m2-cC
11 5eyo-a2-m1-cC 88 80 0.2222 0.2273 0.2500 0.002 5eyo-a2-m1-cC_5eyo-a2-m2-cC
12 1r05-a1-m1-cB 87 80 0.2444 0.2529 0.2750 0.003 1r05-a1-m1-cA_1r05-a1-m1-cB
13 1r05-a1-m1-cA 87 80 0.2444 0.2529 0.2750 0.003 1r05-a1-m1-cA_1r05-a1-m1-cB
14 7f09-a2-m1-cD 65 49 0.2000 0.2769 0.3673 0.037 7f09-a2-m1-cD_7f09-a2-m1-cC
15 7ssa-a1-m1-cL 67 62 0.2333 0.3134 0.3387 0.044 7ssa-a1-m1-cK_7ssa-a1-m1-cL
16 7ssa-a1-m1-cK 67 62 0.2333 0.3134 0.3387 0.044 7ssa-a1-m1-cK_7ssa-a1-m1-cL
17 1ukl-a2-m1-cF 58 71 0.2778 0.4310 0.3521 0.15 1ukl-a2-m1-cE_1ukl-a2-m1-cF
18 1ukl-a2-m1-cE 58 71 0.2778 0.4310 0.3521 0.15 1ukl-a2-m1-cE_1ukl-a2-m1-cF
19 7y62-a1-m1-cB 69 50 0.1889 0.2464 0.3400 0.21 7y62-a1-m1-cB_7y62-a1-m1-cA
20 7y62-a1-m1-cA 74 50 0.2000 0.2432 0.3600 0.28 7y62-a1-m1-cB_7y62-a1-m1-cA
21 6fx5-a1-m1-cB 74 50 0.2000 0.2432 0.3600 0.52 6fx5-a1-m1-cA_6fx5-a1-m1-cB
22 7eod-a2-m1-cC 66 49 0.2000 0.2727 0.3673 0.54 7eod-a2-m1-cC_7eod-a2-m1-cD
23 7d8s-a2-m1-cD 175 60 0.2333 0.1200 0.3500 0.54 7d8s-a2-m1-cD_7d8s-a2-m1-cC
24 7f09-a2-m1-cC 67 49 0.1889 0.2537 0.3469 1.3 7f09-a2-m1-cD_7f09-a2-m1-cC
25 7eod-a2-m1-cD 69 48 0.1889 0.2464 0.3542 2.0 7eod-a2-m1-cC_7eod-a2-m1-cD
26 7d8r-a2-m1-cC 168 58 0.2222 0.1190 0.3448 4.5 7d8r-a2-m1-cC_7d8r-a2-m1-cD
27 4qgp-a2-m1-cA 106 48 0.1556 0.1321 0.2917 4.9 4qgp-a2-m1-cB_4qgp-a2-m1-cA
28 4qgp-a1-m1-cA 106 48 0.1556 0.1321 0.2917 4.9 4qgp-a1-m2-cB_4qgp-a1-m1-cA
29 4qgp-a2-m1-cB 105 48 0.1556 0.1333 0.2917 5.1 4qgp-a2-m1-cB_4qgp-a2-m1-cA
30 4qgp-a1-m2-cB 105 48 0.1556 0.1333 0.2917 5.1 4qgp-a1-m1-cB_4qgp-a1-m2-cB, 4qgp-a1-m2-cB_4qgp-a1-m1-cA
31 4qgp-a1-m1-cB 105 48 0.1556 0.1333 0.2917 5.1 4qgp-a1-m1-cB_4qgp-a1-m2-cB
32 7d8r-a2-m1-cD 174 58 0.2222 0.1149 0.3448 8.2 7d8r-a2-m1-cC_7d8r-a2-m1-cD
33 3vx6-a2-m2-cA 265 19 0.1222 0.0415 0.5789 8.9 3vx6-a2-m1-cA_3vx6-a2-m2-cA
34 3vx6-a2-m1-cA 265 19 0.1222 0.0415 0.5789 8.9 3vx6-a2-m1-cA_3vx6-a2-m2-cA

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Reference:
Jacob Schwartz et al.

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