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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=94)
LTPFQKQAHNKIEKRYRININTKIARLQQIIPWVASEQTAFEVGSTKLNKSMILEKAVDY
ILYLQNNERLYEMEVQRLKSEIDTLKQDQKLEHH

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 7f2f-a1-m1-cB 94 94 1.0000 1.0000 1.0000 9.04e-66 7f2f-a1-m1-cA_7f2f-a1-m1-cB
2 7f2f-a1-m1-cA 90 90 0.9468 0.9889 0.9889 1.38e-59 7f2f-a1-m1-cA_7f2f-a1-m1-cB
3 1am9-a1-m1-cD 76 67 0.3298 0.4079 0.4627 2.75e-10 1am9-a1-m1-cD_1am9-a1-m1-cC
4 1am9-a1-m1-cC 82 67 0.3298 0.3780 0.4627 2.83e-10 1am9-a1-m1-cD_1am9-a1-m1-cC
5 1an4-a1-m1-cB 65 62 0.2660 0.3846 0.4032 1.60e-05 1an4-a1-m1-cA_1an4-a1-m1-cB
6 1an4-a1-m1-cA 65 62 0.2660 0.3846 0.4032 1.60e-05 1an4-a1-m1-cA_1an4-a1-m1-cB
7 7d8t-a1-m1-cB 199 71 0.2872 0.1357 0.3803 8.03e-05 7d8t-a1-m1-cA_7d8t-a1-m1-cB
8 7d8t-a1-m1-cA 199 71 0.2872 0.1357 0.3803 8.03e-05 7d8t-a1-m1-cA_7d8t-a1-m1-cB
9 7d8s-a2-m1-cC 184 67 0.2766 0.1413 0.3881 1.41e-04 7d8s-a2-m1-cD_7d8s-a2-m1-cC
10 5eyo-a2-m2-cC 88 79 0.2128 0.2273 0.2532 0.002 5eyo-a2-m1-cC_5eyo-a2-m2-cC
11 5eyo-a2-m1-cC 88 79 0.2128 0.2273 0.2532 0.002 5eyo-a2-m1-cC_5eyo-a2-m2-cC
12 1r05-a1-m1-cB 87 83 0.2447 0.2644 0.2771 0.002 1r05-a1-m1-cA_1r05-a1-m1-cB
13 1r05-a1-m1-cA 87 83 0.2447 0.2644 0.2771 0.002 1r05-a1-m1-cA_1r05-a1-m1-cB
14 7f09-a2-m1-cD 65 48 0.1915 0.2769 0.3750 0.023 7f09-a2-m1-cD_7f09-a2-m1-cC
15 1ukl-a2-m1-cF 58 70 0.2553 0.4138 0.3429 0.036 1ukl-a2-m1-cE_1ukl-a2-m1-cF
16 1ukl-a2-m1-cE 58 70 0.2553 0.4138 0.3429 0.036 1ukl-a2-m1-cE_1ukl-a2-m1-cF
17 5i4z-a1-m1-cB 74 48 0.2340 0.2973 0.4583 0.051 5i4z-a1-m1-cA_5i4z-a1-m1-cB
18 5i4z-a1-m1-cA 74 48 0.2340 0.2973 0.4583 0.051 5i4z-a1-m1-cA_5i4z-a1-m1-cB
19 7ssa-a1-m1-cL 67 61 0.2128 0.2985 0.3279 0.075 7ssa-a1-m1-cK_7ssa-a1-m1-cL
20 7ssa-a1-m1-cK 67 61 0.2128 0.2985 0.3279 0.075 7ssa-a1-m1-cK_7ssa-a1-m1-cL
21 7y62-a1-m1-cB 69 51 0.1809 0.2464 0.3333 0.12 7y62-a1-m1-cB_7y62-a1-m1-cA
22 7y62-a1-m1-cA 74 49 0.1915 0.2432 0.3673 0.16 7y62-a1-m1-cB_7y62-a1-m1-cA
23 6fx5-a1-m1-cB 74 49 0.1915 0.2432 0.3673 0.26 6fx5-a1-m1-cA_6fx5-a1-m1-cB
24 7eod-a2-m1-cC 66 76 0.2766 0.3939 0.3421 0.39 7eod-a2-m1-cC_7eod-a2-m1-cD
25 7d8s-a2-m1-cD 175 59 0.2234 0.1200 0.3559 0.41 7d8s-a2-m1-cD_7d8s-a2-m1-cC
26 7f09-a2-m1-cC 67 48 0.1809 0.2537 0.3542 0.75 7f09-a2-m1-cD_7f09-a2-m1-cC
27 7eod-a2-m1-cD 69 75 0.2660 0.3623 0.3333 0.95 7eod-a2-m1-cC_7eod-a2-m1-cD
28 7d8r-a2-m1-cC 168 57 0.2128 0.1190 0.3509 3.4 7d8r-a2-m1-cC_7d8r-a2-m1-cD
29 7d8r-a2-m1-cD 174 57 0.2128 0.1149 0.3509 6.5 7d8r-a2-m1-cC_7d8r-a2-m1-cD
30 2ewv-a1-m6-cA 343 56 0.1809 0.0496 0.3036 7.8 2ewv-a1-m2-cA_2ewv-a1-m6-cA
31 2ewv-a1-m2-cA 343 56 0.1809 0.0496 0.3036 7.8 2ewv-a1-m2-cA_2ewv-a1-m6-cA

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Reference:
Jacob Schwartz et al.

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