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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=79)
LTTEQQATAQKIYDDYYTQTSALRQQLISKRYEYNALLTASSPDTAKINAVAKEMESLGQ
KLDEQRVKRDVAMAQAGIP

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3lay-a1-m1-cB 79 79 1.0000 1.0000 1.0000 7.48e-53 3lay-a1-m1-cA_3lay-a1-m1-cB
2 3lay-a1-m1-cA 79 79 1.0000 1.0000 1.0000 7.48e-53 3lay-a1-m1-cA_3lay-a1-m1-cB
3 3lay-a1-m1-cF 78 78 0.9873 1.0000 1.0000 1.19e-51 3lay-a1-m1-cG_3lay-a1-m1-cF
4 3lay-a1-m1-cG 77 77 0.9747 1.0000 1.0000 2.27e-51 3lay-a1-m1-cG_3lay-a1-m1-cF
5 3j91-a1-m9-c3 240 60 0.2405 0.0792 0.3167 1.2 3j91-a1-m54-c3_3j91-a1-m9-c3, 3j91-a1-m8-c3_3j91-a1-m9-c3
6 3j91-a1-m8-c3 240 60 0.2405 0.0792 0.3167 1.2 3j91-a1-m8-c3_3j91-a1-m9-c3
7 3j91-a1-m54-c3 240 60 0.2405 0.0792 0.3167 1.2 3j91-a1-m54-c3_3j91-a1-m9-c3
8 3zfe-a1-m9-cC 242 60 0.2405 0.0785 0.3167 1.2 3zfe-a1-m7-cC_3zfe-a1-m9-cC, 3zfe-a1-m8-cC_3zfe-a1-m9-cC
9 3zfe-a1-m8-cC 242 60 0.2405 0.0785 0.3167 1.2 3zfe-a1-m8-cC_3zfe-a1-m9-cC
10 3zfe-a1-m7-cC 242 60 0.2405 0.0785 0.3167 1.2 3zfe-a1-m7-cC_3zfe-a1-m9-cC
11 2anu-a3-m6-cA 220 63 0.2025 0.0727 0.2540 2.9 2anu-a3-m1-cF_2anu-a3-m6-cA
12 2anu-a1-m3-cA 220 63 0.2025 0.0727 0.2540 2.9 2anu-a1-m3-cC_2anu-a1-m3-cA
13 2anu-a1-m2-cA 220 63 0.2025 0.0727 0.2540 2.9 2anu-a1-m3-cB_2anu-a1-m2-cA

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Reference:
Jacob Schwartz et al.

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