Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=79)
LVAIQVEALDRHRLLSDVTRALADEKVNILSASVTTSGDRVAISRFTFEMGDPKHLGHLL
NAVRNVEGVYDVYRVTSAA

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 6lxg-a1-m1-cB 79 79 1.0000 1.0000 1.0000 1.03e-52 6lxg-a1-m1-cA_6lxg-a1-m1-cB
2 6lxg-a1-m1-cA 79 79 1.0000 1.0000 1.0000 1.03e-52 6lxg-a1-m1-cA_6lxg-a1-m1-cB
3 6mpr-a1-m1-cB 540 39 0.1899 0.0278 0.3846 0.50 6mpr-a1-m1-cB_6mpr-a1-m1-cA
4 5agv-a2-m1-cA 390 41 0.2152 0.0436 0.4146 0.84 5agv-a2-m1-cA_5agv-a2-m3-cB
5 5agv-a2-m3-cB 393 41 0.2152 0.0433 0.4146 0.84 5agv-a2-m1-cA_5agv-a2-m3-cB
6 6dly-a1-m1-cA 375 32 0.1772 0.0373 0.4375 1.7 6dly-a1-m1-cA_6dly-a1-m1-cB
7 6dly-a1-m1-cB 384 32 0.1772 0.0365 0.4375 1.7 6dly-a1-m1-cA_6dly-a1-m1-cB
8 1vgv-a2-m1-cD 364 36 0.1772 0.0385 0.3889 3.0 1vgv-a2-m1-cC_1vgv-a2-m1-cD
9 1vgv-a2-m1-cC 358 36 0.1772 0.0391 0.3889 3.1 1vgv-a2-m1-cC_1vgv-a2-m1-cD
10 1pho-a1-m3-cA 330 30 0.1139 0.0273 0.3000 4.7 1pho-a1-m3-cA_1pho-a1-m2-cA
11 1pho-a1-m2-cA 330 30 0.1139 0.0273 0.3000 4.7 1pho-a1-m3-cA_1pho-a1-m2-cA
12 6mpr-a1-m1-cA 548 28 0.1392 0.0201 0.3929 9.4 6mpr-a1-m1-cB_6mpr-a1-m1-cA
13 2xyl-a1-m2-cA 312 44 0.1772 0.0449 0.3182 10.0 2xyl-a1-m1-cA_2xyl-a1-m2-cA
14 2xyl-a1-m1-cA 312 44 0.1772 0.0449 0.3182 10.0 2xyl-a1-m1-cA_2xyl-a1-m2-cA

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600