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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=66)
LVEAQPEWLRAEVKRLSHELAETTREKIQAAEYGLAVLEEKHQLKLQFEELEVDYEAIRS
EEQLKE

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 6pse-a1-m1-cB 66 66 1.0000 1.0000 1.0000 6.79e-40 6pse-a1-m1-cB_6pse-a1-m1-cA
2 6pse-a1-m1-cA 76 66 1.0000 0.8684 1.0000 8.49e-40 6pse-a1-m1-cB_6pse-a1-m1-cA
3 1agx-a1-m4-cA 331 30 0.1970 0.0393 0.4333 0.64 1agx-a1-m1-cA_1agx-a1-m4-cA, 1agx-a1-m2-cA_1agx-a1-m4-cA, 1agx-a1-m3-cA_1agx-a1-m4-cA
4 1agx-a1-m3-cA 331 30 0.1970 0.0393 0.4333 0.64 1agx-a1-m3-cA_1agx-a1-m4-cA
5 1agx-a1-m2-cA 331 30 0.1970 0.0393 0.4333 0.64 1agx-a1-m2-cA_1agx-a1-m4-cA
6 1agx-a1-m1-cA 331 30 0.1970 0.0393 0.4333 0.64 1agx-a1-m1-cA_1agx-a1-m4-cA
7 3bpk-a1-m1-cA 194 42 0.1667 0.0567 0.2619 2.6 3bpk-a1-m1-cA_3bpk-a1-m1-cB
8 3bpk-a1-m1-cB 200 42 0.1667 0.0550 0.2619 2.8 3bpk-a1-m1-cA_3bpk-a1-m1-cB
9 8hgh-a1-m1-cB 1462 58 0.2273 0.0103 0.2586 5.2 8hgh-a1-m1-cA_8hgh-a1-m1-cB
10 8hgh-a1-m1-cA 1462 58 0.2273 0.0103 0.2586 5.2 8hgh-a1-m1-cA_8hgh-a1-m1-cB
11 8hgg-a1-m1-cD 1484 58 0.2273 0.0101 0.2586 5.2 8hgg-a1-m1-cC_8hgg-a1-m1-cD
12 8hgg-a1-m1-cC 1484 58 0.2273 0.0101 0.2586 5.2 8hgg-a1-m1-cC_8hgg-a1-m1-cD
13 3dr5-a1-m2-cA 213 38 0.2121 0.0657 0.3684 5.4 3dr5-a1-m1-cA_3dr5-a1-m2-cA
14 3dr5-a1-m1-cA 213 38 0.2121 0.0657 0.3684 5.4 3dr5-a1-m1-cA_3dr5-a1-m2-cA
15 4twe-a1-m1-cB 706 28 0.1667 0.0156 0.3929 5.5 4twe-a1-m1-cA_4twe-a1-m1-cB
16 4twe-a1-m1-cA 706 28 0.1667 0.0156 0.3929 5.5 4twe-a1-m1-cA_4twe-a1-m1-cB
17 3hm2-a1-m1-cD 165 31 0.1667 0.0667 0.3548 9.2 3hm2-a1-m1-cD_3hm2-a1-m1-cB

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Reference:
Jacob Schwartz et al.

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