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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=86)
LVEIIVETEAQTGVSGINVAGGGKEGIFVRELREDSPAARSLSLQEGDQLLSARVFFENF
KYEDALRLLQCAEPYKVSFCLKRTVP

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 4cmz-a2-m2-cC 86 86 1.0000 1.0000 1.0000 1.20e-58 4cmz-a2-m1-cC_4cmz-a2-m2-cC
2 4cmz-a2-m1-cC 86 86 1.0000 1.0000 1.0000 1.20e-58 4cmz-a2-m1-cC_4cmz-a2-m2-cC
3 4q2q-a1-m2-cA 90 55 0.3023 0.2889 0.4727 4.12e-06 4q2q-a1-m1-cA_4q2q-a1-m2-cA
4 4q2q-a1-m1-cA 90 55 0.3023 0.2889 0.4727 4.12e-06 4q2q-a1-m1-cA_4q2q-a1-m2-cA
5 3tsw-a5-m1-cB 194 55 0.3023 0.1340 0.4727 1.59e-05 3tsw-a5-m1-cB_3tsw-a5-m1-cD
6 3tsw-a5-m1-cD 199 55 0.3023 0.1307 0.4727 1.72e-05 3tsw-a5-m1-cB_3tsw-a5-m1-cD
7 7qrt-a1-m1-cA 92 77 0.3023 0.2826 0.3377 1.12e-04 7qrt-a1-m1-cB_7qrt-a1-m1-cA
8 7qrt-a1-m1-cB 91 77 0.3023 0.2857 0.3377 1.22e-04 7qrt-a1-m1-cB_7qrt-a1-m1-cA
9 2rcz-a1-m1-cA 79 58 0.2442 0.2658 0.3621 5.80e-04 2rcz-a1-m1-cA_2rcz-a1-m1-cB
10 2rcz-a1-m1-cB 81 58 0.2442 0.2593 0.3621 6.84e-04 2rcz-a1-m1-cA_2rcz-a1-m1-cB
11 3cc0-a1-m1-cB 103 48 0.1744 0.1456 0.3125 0.001 3cc0-a1-m1-cC_3cc0-a1-m1-cB
12 2iwq-a1-m2-cA 92 38 0.1744 0.1630 0.3947 0.002 2iwq-a1-m1-cA_2iwq-a1-m2-cA
13 2iwq-a1-m1-cA 92 38 0.1744 0.1630 0.3947 0.002 2iwq-a1-m1-cA_2iwq-a1-m2-cA
14 6nek-a1-m2-cA 86 51 0.2209 0.2209 0.3725 0.003 6nek-a1-m1-cA_6nek-a1-m2-cA
15 6nek-a1-m1-cA 86 51 0.2209 0.2209 0.3725 0.003 6nek-a1-m1-cA_6nek-a1-m2-cA
16 8ah6-a1-m1-cA 101 70 0.3140 0.2673 0.3857 0.005 8ah6-a1-m1-cA_8ah6-a1-m1-cB
17 5jxb-a1-m1-cA 117 70 0.3140 0.2308 0.3857 0.005 5jxb-a1-m1-cA_5jxb-a1-m1-cC
18 8ah6-a1-m1-cB 102 70 0.3140 0.2647 0.3857 0.005 8ah6-a1-m1-cA_8ah6-a1-m1-cB
19 5jxb-a1-m1-cC 119 70 0.3140 0.2269 0.3857 0.006 5jxb-a1-m1-cA_5jxb-a1-m1-cC
20 1tp5-a2-m2-cA 115 70 0.3140 0.2348 0.3857 0.006 1tp5-a2-m1-cA_1tp5-a2-m2-cA
21 1tp5-a2-m1-cA 115 70 0.3140 0.2348 0.3857 0.006 1tp5-a2-m1-cA_1tp5-a2-m2-cA
22 3cby-a1-m1-cB 98 56 0.1977 0.1735 0.3036 0.008 3cby-a1-m1-cB_3cby-a1-m1-cA
23 2xkx-a1-m1-cB 718 70 0.3140 0.0376 0.3857 0.010 2xkx-a1-m1-cB_2xkx-a1-m1-cA
24 2xkx-a1-m1-cB 718 63 0.2326 0.0279 0.3175 0.39 2xkx-a1-m1-cB_2xkx-a1-m1-cA
25 2xkx-a1-m1-cA 721 70 0.3140 0.0374 0.3857 0.010 2xkx-a1-m1-cB_2xkx-a1-m1-cA
26 2xkx-a1-m1-cA 721 63 0.2326 0.0277 0.3175 0.39 2xkx-a1-m1-cB_2xkx-a1-m1-cA
27 5glj-a1-m1-cB 93 84 0.2791 0.2581 0.2857 0.065 5glj-a1-m1-cB_5glj-a1-m1-cA, 5glj-a1-m1-cB_5glj-a1-m1-cD
28 5glj-a1-m1-cD 96 84 0.2791 0.2500 0.2857 0.078 5glj-a1-m1-cA_5glj-a1-m1-cD, 5glj-a1-m1-cB_5glj-a1-m1-cD
29 5glj-a1-m1-cA 96 84 0.2791 0.2500 0.2857 0.078 5glj-a1-m1-cA_5glj-a1-m1-cD, 5glj-a1-m1-cB_5glj-a1-m1-cA
30 4amh-a1-m1-cB 92 68 0.2326 0.2174 0.2941 0.092 4amh-a1-m1-cB_4amh-a1-m1-cA
31 3rl8-a1-m1-cC 95 63 0.2326 0.2105 0.3175 0.093 3rl8-a1-m1-cA_3rl8-a1-m1-cC, 3rl8-a1-m1-cB_3rl8-a1-m1-cC, 3rl8-a1-m1-cD_3rl8-a1-m1-cC
32 2x7z-a1-m2-cA 99 68 0.2326 0.2020 0.2941 0.094 2x7z-a1-m1-cA_2x7z-a1-m2-cA
33 2x7z-a1-m1-cA 99 68 0.2326 0.2020 0.2941 0.094 2x7z-a1-m1-cA_2x7z-a1-m2-cA
34 4amh-a1-m1-cA 94 68 0.2326 0.2128 0.2941 0.094 4amh-a1-m1-cB_4amh-a1-m1-cA
35 3rl8-a1-m1-cD 94 63 0.2326 0.2128 0.3175 0.099 3rl8-a1-m1-cD_3rl8-a1-m1-cC, 3rl8-a1-m1-cE_3rl8-a1-m1-cD
36 3rl8-a1-m1-cA 94 63 0.2326 0.2128 0.3175 0.099 3rl8-a1-m1-cA_3rl8-a1-m1-cC, 3rl8-a1-m1-cB_3rl8-a1-m1-cA
37 3zrt-a1-m1-cA 197 63 0.2326 0.1015 0.3175 0.10 3zrt-a1-m1-cC_3zrt-a1-m1-cA
38 3zrt-a1-m1-cC 188 63 0.2326 0.1064 0.3175 0.10 3zrt-a1-m1-cC_3zrt-a1-m1-cA
39 3rl8-a1-m1-cE 90 63 0.2326 0.2222 0.3175 0.10 3rl8-a1-m1-cE_3rl8-a1-m1-cD
40 3rl8-a1-m1-cB 90 63 0.2326 0.2222 0.3175 0.10 3rl8-a1-m1-cB_3rl8-a1-m1-cA, 3rl8-a1-m1-cB_3rl8-a1-m1-cC
41 2q7x-a1-m1-cB 284 55 0.2326 0.0704 0.3636 0.16 2q7x-a1-m1-cB_2q7x-a1-m1-cA
42 1pdr-a1-m6-cA 96 49 0.2093 0.1875 0.3673 0.56 1pdr-a1-m2-cA_1pdr-a1-m6-cA, 1pdr-a1-m3-cA_1pdr-a1-m6-cA, 1pdr-a1-m5-cA_1pdr-a1-m6-cA
43 1pdr-a1-m5-cA 96 49 0.2093 0.1875 0.3673 0.56 1pdr-a1-m5-cA_1pdr-a1-m6-cA
44 1pdr-a1-m3-cA 96 49 0.2093 0.1875 0.3673 0.56 1pdr-a1-m3-cA_1pdr-a1-m6-cA
45 1pdr-a1-m2-cA 96 49 0.2093 0.1875 0.3673 0.56 1pdr-a1-m2-cA_1pdr-a1-m6-cA
46 3e17-a1-m1-cB 79 45 0.1744 0.1899 0.3333 0.64 3e17-a1-m1-cB_3e17-a1-m1-cA
47 3e17-a1-m1-cA 80 45 0.1744 0.1875 0.3333 0.69 3e17-a1-m1-cB_3e17-a1-m1-cA
48 7qsb-a1-m1-cB 80 46 0.1744 0.1875 0.3261 1.0 7qsb-a1-m1-cB_7qsb-a1-m1-cA
49 6jjo-a1-m2-cE 388 42 0.1512 0.0335 0.3095 3.1 6jjo-a1-m2-cA_6jjo-a1-m2-cE
50 6jjo-a1-m1-cE 388 42 0.1512 0.0335 0.3095 3.1 6jjo-a1-m2-cF_6jjo-a1-m1-cE
51 6jjo-a1-m2-cF 379 42 0.1512 0.0343 0.3095 3.5 6jjo-a1-m2-cF_6jjo-a1-m1-cE
52 6jjo-a1-m2-cA 381 42 0.1512 0.0341 0.3095 3.6 6jjo-a1-m2-cA_6jjo-a1-m2-cE
53 6jjk-a1-m2-cA 381 42 0.1512 0.0341 0.3095 3.6 6jjk-a1-m2-cA_6jjk-a1-m2-cB
54 6jjk-a1-m2-cB 392 42 0.1512 0.0332 0.3095 3.6 6jjk-a1-m2-cA_6jjk-a1-m2-cB
55 3gco-a1-m3-cA 302 32 0.1512 0.0430 0.4062 3.6 3gco-a1-m2-cA_3gco-a1-m3-cA
56 3gco-a1-m2-cA 302 32 0.1512 0.0430 0.4062 3.6 3gco-a1-m2-cA_3gco-a1-m3-cA
57 4q2n-a3-m1-cF 98 72 0.1860 0.1633 0.2222 5.2 4q2n-a3-m1-cE_4q2n-a3-m1-cF
58 7qcr-a1-m1-cA 87 49 0.2093 0.2069 0.3673 8.8 7qcr-a1-m1-cB_7qcr-a1-m1-cA
59 3d47-a5-m1-cH 405 28 0.1279 0.0272 0.3929 9.9 3d47-a5-m1-cC_3d47-a5-m1-cH, 3d47-a5-m1-cD_3d47-a5-m1-cH, 3d47-a5-m1-cG_3d47-a5-m1-cH
60 3d47-a5-m1-cG 405 28 0.1279 0.0272 0.3929 9.9 3d47-a5-m1-cG_3d47-a5-m1-cH
61 3d47-a5-m1-cD 405 28 0.1279 0.0272 0.3929 9.9 3d47-a5-m1-cD_3d47-a5-m1-cH
62 3d47-a5-m1-cC 405 28 0.1279 0.0272 0.3929 9.9 3d47-a5-m1-cC_3d47-a5-m1-cH

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Reference:
Jacob Schwartz et al.

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