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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=76)
LVTTATFSIGSTGLVVYDYQQLLIAYKPAPGTCCYIKIAPESIPSLEALTRKVHNFQECF
LGAVSTLCGEVPLYYI

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2yad-a2-m1-cD 76 76 1.0000 1.0000 1.0000 2.26e-51 2yad-a2-m1-cD_2yad-a2-m1-cC
2 2yad-a2-m1-cC 80 79 1.0000 0.9500 0.9620 2.65e-49 2yad-a2-m1-cD_2yad-a2-m1-cC
3 5goa-a1-m1-cD 3423 35 0.1711 0.0038 0.3714 0.076 5goa-a1-m1-cC_5goa-a1-m1-cD
4 5goa-a1-m1-cC 3423 35 0.1711 0.0038 0.3714 0.076 5goa-a1-m1-cC_5goa-a1-m1-cD
5 6jh6-a1-m1-cH 3454 35 0.1711 0.0038 0.3714 0.076 6jh6-a1-m1-cF_6jh6-a1-m1-cH
6 6jh6-a1-m1-cF 3454 35 0.1711 0.0038 0.3714 0.076 6jh6-a1-m1-cF_6jh6-a1-m1-cH
7 6jg3-a1-m1-cD 3477 35 0.1711 0.0037 0.3714 0.076 6jg3-a1-m1-cB_6jg3-a1-m1-cD
8 6jg3-a1-m1-cB 3477 35 0.1711 0.0037 0.3714 0.076 6jg3-a1-m1-cB_6jg3-a1-m1-cD
9 6jgz-a1-m1-cH 3485 35 0.1711 0.0037 0.3714 0.076 6jgz-a1-m1-cF_6jgz-a1-m1-cH
10 6jgz-a1-m1-cF 3485 35 0.1711 0.0037 0.3714 0.076 6jgz-a1-m1-cF_6jgz-a1-m1-cH
11 6jrs-a1-m1-cJ 3488 35 0.1711 0.0037 0.3714 0.076 6jrs-a1-m1-cG_6jrs-a1-m1-cJ
12 6jrs-a1-m1-cG 3488 35 0.1711 0.0037 0.3714 0.076 6jrs-a1-m1-cG_6jrs-a1-m1-cJ
13 6jii-a1-m1-cK 3508 35 0.1711 0.0037 0.3714 0.076 6jii-a1-m1-cH_6jii-a1-m1-cK
14 6jii-a1-m1-cH 3508 35 0.1711 0.0037 0.3714 0.076 6jii-a1-m1-cH_6jii-a1-m1-cK
15 6ji8-a1-m1-cJ 3511 35 0.1711 0.0037 0.3714 0.076 6ji8-a1-m1-cG_6ji8-a1-m1-cJ
16 6ji8-a1-m1-cG 3511 35 0.1711 0.0037 0.3714 0.076 6ji8-a1-m1-cG_6ji8-a1-m1-cJ
17 5l1d-a1-m1-cG 3570 35 0.1711 0.0036 0.3714 0.076 5l1d-a1-m1-cE_5l1d-a1-m1-cG
18 5l1d-a1-m1-cE 3570 35 0.1711 0.0036 0.3714 0.076 5l1d-a1-m1-cE_5l1d-a1-m1-cG
19 4kxf-a11-m5-cN 881 34 0.1316 0.0114 0.2941 1.5 4kxf-a11-m5-cN_4kxf-a11-m1-cD, 4kxf-a11-m5-cN_4kxf-a11-m5-cD
20 4kxf-a11-m5-cD 899 34 0.1316 0.0111 0.2941 1.5 4kxf-a11-m1-cD_4kxf-a11-m5-cD, 4kxf-a11-m5-cN_4kxf-a11-m5-cD
21 4kxf-a11-m1-cD 899 34 0.1316 0.0111 0.2941 1.5 4kxf-a11-m1-cD_4kxf-a11-m5-cD, 4kxf-a11-m5-cN_4kxf-a11-m1-cD
22 3jbl-a1-m1-cK 908 34 0.1316 0.0110 0.2941 1.5 3jbl-a1-m1-cJ_3jbl-a1-m1-cK
23 3jbl-a1-m1-cJ 908 34 0.1316 0.0110 0.2941 1.5 3jbl-a1-m1-cJ_3jbl-a1-m1-cK
24 3dr2-a1-m1-cB 297 26 0.1316 0.0337 0.3846 9.2 3dr2-a1-m1-cB_3dr2-a1-m1-cA
25 3dr2-a1-m1-cA 299 26 0.1316 0.0334 0.3846 9.2 3dr2-a1-m1-cB_3dr2-a1-m1-cA

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Reference:
Jacob Schwartz et al.

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