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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=89)
LVVEELEQYPNGKIVRLLFHGEQAKLPIISHIVQEYQVEVSIIQGNIQQTKQGAVGSLYI
QLLGEEQNILAAIEGLRKLRVETEVIGNE

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2qsw-a1-m2-cA 89 89 1.0000 1.0000 1.0000 6.63e-57 2qsw-a1-m1-cA_2qsw-a1-m2-cA
2 2qsw-a1-m1-cA 89 89 1.0000 1.0000 1.0000 6.63e-57 2qsw-a1-m1-cA_2qsw-a1-m2-cA
3 2qrr-a1-m1-cA 93 69 0.2809 0.2688 0.3623 2.24e-05 2qrr-a1-m1-cA_2qrr-a1-m1-cB
4 2qrr-a1-m1-cB 94 69 0.2809 0.2660 0.3623 2.30e-05 2qrr-a1-m1-cA_2qrr-a1-m1-cB
5 6cvl-a1-m1-cD 344 74 0.2247 0.0581 0.2703 7.65e-04 6cvl-a1-m1-cC_6cvl-a1-m1-cD
6 6cvl-a1-m1-cC 343 74 0.2247 0.0583 0.2703 7.88e-04 6cvl-a1-m1-cC_6cvl-a1-m1-cD
7 3tui-a2-m1-cH 344 74 0.2247 0.0581 0.2703 8.95e-04 3tui-a2-m1-cG_3tui-a2-m1-cH
8 3tui-a2-m1-cG 343 74 0.2247 0.0583 0.2703 0.001 3tui-a2-m1-cG_3tui-a2-m1-cH
9 5al9-a1-m2-cA 267 72 0.2135 0.0712 0.2639 0.18 5al9-a1-m1-cA_5al9-a1-m2-cA
10 5al9-a1-m1-cA 267 72 0.2135 0.0712 0.2639 0.18 5al9-a1-m1-cA_5al9-a1-m2-cA
11 7k93-a2-m1-cD 325 35 0.1348 0.0369 0.3429 3.1 7k93-a2-m1-cD_7k93-a2-m1-cC
12 7k93-a2-m1-cC 335 35 0.1348 0.0358 0.3429 3.1 7k93-a2-m1-cD_7k93-a2-m1-cC
13 1pyi-a1-m1-cA 88 26 0.1011 0.1023 0.3462 6.1 1pyi-a1-m1-cB_1pyi-a1-m1-cA
14 4g8s-a1-m1-cB 176 34 0.1236 0.0625 0.3235 8.3 4g8s-a1-m1-cB_4g8s-a1-m1-cA
15 4g8s-a1-m1-cA 177 34 0.1236 0.0621 0.3235 8.8 4g8s-a1-m1-cB_4g8s-a1-m1-cA

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Reference:
Jacob Schwartz et al.

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