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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=80)
LWDNVECNRHMLSRYINPAKLTPYLRQCKVIDEQDEDEVLNANRAGRLLDILHTKGQRGY
VVFLESLEFYYPELYKLVTG

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 4jup-a1-m1-cB 80 80 1.0000 1.0000 1.0000 2.24e-56 4jup-a1-m1-cA_4jup-a1-m1-cB
2 4jup-a1-m1-cA 80 80 1.0000 1.0000 1.0000 2.24e-56 4jup-a1-m1-cA_4jup-a1-m1-cB
3 4lwd-a2-m6-cA 90 87 0.9875 0.8778 0.9080 3.86e-53 4lwd-a2-m1-cA_4lwd-a2-m6-cA, 4lwd-a2-m5-cA_4lwd-a2-m6-cA
4 4lwd-a2-m5-cA 90 87 0.9875 0.8778 0.9080 3.86e-53 4lwd-a2-m5-cA_4lwd-a2-m6-cA
5 4lwd-a2-m1-cA 90 87 0.9875 0.8778 0.9080 3.86e-53 4lwd-a2-m1-cA_4lwd-a2-m6-cA
6 4ucz-a1-m1-cA 381 85 0.3000 0.0630 0.2824 3.8 4ucz-a1-m1-cB_4ucz-a1-m1-cA
7 4ud0-a1-m2-cB 350 53 0.2250 0.0514 0.3396 5.5 4ud0-a1-m1-cB_4ud0-a1-m2-cB
8 4ud0-a1-m1-cB 350 53 0.2250 0.0514 0.3396 5.5 4ud0-a1-m1-cB_4ud0-a1-m2-cB

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Reference:
Jacob Schwartz et al.

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