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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=46)
LYDMNGCYSRLKELVPTLPQNRKVSKVEILQHVIDYIRDLQLELNS

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 6u2u-a1-m1-cA 46 46 1.0000 1.0000 1.0000 1.84e-28 6u2u-a1-m1-cB_6u2u-a1-m1-cA
2 6u2u-a1-m1-cB 44 44 0.9565 1.0000 1.0000 7.30e-27 6u2u-a1-m1-cB_6u2u-a1-m1-cA
3 4aya-a1-m1-cB 48 46 0.7609 0.7292 0.7609 2.51e-21 4aya-a1-m1-cB_4aya-a1-m1-cA
4 4aya-a1-m1-cA 59 46 0.7609 0.5932 0.7609 2.97e-21 4aya-a1-m1-cB_4aya-a1-m1-cA
5 2lfh-a1-m1-cB 68 42 0.6087 0.4118 0.6667 5.93e-14 2lfh-a1-m1-cA_2lfh-a1-m1-cB
6 2lfh-a1-m1-cA 68 42 0.6087 0.4118 0.6667 5.93e-14 2lfh-a1-m1-cA_2lfh-a1-m1-cB
7 7z5k-a1-m1-cA 56 41 0.3696 0.3036 0.4146 0.009 7z5k-a1-m1-cA_7z5k-a1-m1-cB
8 7z5k-a1-m1-cB 56 41 0.3696 0.3036 0.4146 0.010 7z5k-a1-m1-cA_7z5k-a1-m1-cB
9 7eod-a2-m1-cC 66 34 0.3261 0.2273 0.4412 0.013 7eod-a2-m1-cC_7eod-a2-m1-cD
10 1mdy-a2-m1-cD 62 41 0.3478 0.2581 0.3902 0.040 1mdy-a2-m1-cC_1mdy-a2-m1-cD
11 1mdy-a2-m1-cC 62 41 0.3478 0.2581 0.3902 0.040 1mdy-a2-m1-cC_1mdy-a2-m1-cD
12 2ql2-a3-m1-cB 59 40 0.2609 0.2034 0.3000 0.083 2ql2-a3-m1-cD_2ql2-a3-m1-cB
13 2ql2-a3-m1-cD 57 40 0.2609 0.2105 0.3000 0.088 2ql2-a3-m1-cD_2ql2-a3-m1-cB
14 8ay1-a1-m1-cB 409 24 0.1957 0.0220 0.3750 4.0 8ay1-a1-m1-cB_8ay1-a1-m1-cA
15 2oy9-a1-m1-cB 80 25 0.1739 0.1000 0.3200 4.7 2oy9-a1-m1-cB_2oy9-a1-m1-cA
16 2oy9-a1-m1-cA 83 25 0.1739 0.0964 0.3200 5.8 2oy9-a1-m1-cB_2oy9-a1-m1-cA

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Reference:
Jacob Schwartz et al.

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